Gene
| Gene Model ID | pfu_aug2.0_21060.1_03267 |
|---|---|
| Locus | scaffold21060.1 : 1 ... 786 : + |
| To GenomeBrowser | scaffold21060.1:1..786 |
| Genes list of scaffold | scaffold21060.1 |
| Synonym | pfu_aug1.0_16038.1_61567 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| isoform a | GO:0000122 GO:0000977 GO:0001106 GO:0001710 GO:0005634 GO:0005737 GO:0007163 GO:0007370 GO:0007417 GO:0007443 GO:0007517 GO:0008407 GO:0030034 GO:0031065 GO:0031941 GO:0034332 GO:0035017 GO:0035099 GO:0035317 GO:0042060 GO:0043005 GO:0043025 GO:0045944 GO:0046847 GO:0048749 GO:0048800 GO:0048813 GO:0055059 GO:0070491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_21060.1_03267.t1 | 2 | 1 | Fascin | 2 | 82 | 1.3e-19 | 70.3 | 2.4e-13 | 1.8e-09 | 37.6 |
| pfu_aug2.0_21060.1_03267.t1 | 2 | 2 | Fascin | 118 | 203 | 1.3e-19 | 70.3 | 2.7e-11 | 2.0e-07 | 31.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_21060.1_03267.t1 | gi|676490653|ref|XP_009065340.1| | hypothetical protein LOTGIDRAFT_108036 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_21060.1_03267.t1 | gi|347964640|ref|XP_003437121.1| | AGAP012991-PA [Anopheles gambiae str. PEST] | 1.0e-39 |
| pfu_aug2.0_21060.1_03267.t1 | gi|524911812|ref|XP_005110766.1| | PREDICTED: protein singed-like, partial [Aplysia californica] | 5.0e-39 |
| pfu_aug2.0_21060.1_03267.t1 | gi|195045719|ref|XP_001992025.1| | GH24440 [Drosophila grimshawi] | 8.0e-39 |
| pfu_aug2.0_21060.1_03267.t1 | gi|91089337|ref|XP_972494.1| | PREDICTED: protein singed [Tribolium castaneum] | 2.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_21060.1_03267.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21060.1_03267.t1 gttgaatacgacaaaaagtcaaagaagtggggaatattcaccgtggataatagattctggaatgtcaacgaagcaaatac tatcattgctgatgcttccaagctgagtacggaatgcctttttgattttgagtggaagggcgacggaaaagccgcaataa aggcttctaaccggaagtactttacaaataaaccgatcgggaacgccgtaactagtagcgacgtagtatcagaaaaagaa atttacgtcattaagcttgtaaatcggccactgatcgtcttcaaatgtgaatatggatttgttgctcaaaagacgtctgg gtccaataaaacagagtacatttgtaacaagtccatgtatgacgtcatcttattggaacaggaagaaaatggcgtctatc atttgaaaggtgacaatgagaagtactggagtgtgacggatggtcacacgatcaaagctaacagttcaaagccctcgcca ttcatactggaatttagaggaaattcgcttctttccatcttggctcctaacggcaagtacatccgggcggagaaaagtgg cgggttccgagctgtttctgacgtcgttgataaaaattctctgtggtatttttga |
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Protein
| Protein ID | pfu_aug2.0_21060.1_03267.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_21060.1_03267.t1 VEYDKKSKKWGIFTVDNRFWNVNEANTIIADASKLSTECLFDFEWKGDGKAAIKASNRKYFTNKPIGNAVTSSDVVSEKE IYVIKLVNRPLIVFKCEYGFVAQKTSGSNKTEYICNKSMYDVILLEQEENGVYHLKGDNEKYWSVTDGHTIKANSSKPSP FILEFRGNSLLSILAPNGKYIRAEKSGGFRAVSDVVDKNSLWYF |
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