Gene
| Gene Model ID | pfu_aug2.0_2109.1_32048 |
|---|---|
| Locus | scaffold2109.1 : 14269 ... 38415 : - |
| To GenomeBrowser | scaffold2109.1:14269..38415 |
| Genes list of scaffold | scaffold2109.1 |
| Synonym | pfu_aug1.0_3229.1_51940 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2109.1_32048.t1 | 1 | 1 | RNase_T | 24 | 196 | 1.2e-26 | 93.9 | 9.5e-31 | 1.4e-26 | 93.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2109.1_32048.t1 | gi|676477600|ref|XP_009061161.1| | hypothetical protein LOTGIDRAFT_126582 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2109.1_32048.t1 | gi|390361519|ref|XP_781221.3| | PREDICTED: ERI1 exoribonuclease 3 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_2109.1_32048.t1 | gi|524883552|ref|XP_005098403.1| | PREDICTED: ERI1 exoribonuclease 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2109.1_32048.t1 | gi|669291863|ref|XP_008639012.1| | PREDICTED: ERI1 exoribonuclease 3 [Corvus brachyrhynchos] | 0.0 |
| pfu_aug2.0_2109.1_32048.t1 | gi|727057070|ref|XP_010407236.1| | PREDICTED: ERI1 exoribonuclease 3 [Corvus cornix cornix] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2109.1_32048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2109.1_32048.t1 atggcaatttctcttcagcagtctcaaggagcagaaatcaaaccaaatcagcagaaattcaagtatcttttggtgttgga ttttgaggcaacttgtaaggatggagaaaaaatagaaccacaggagataatagaatttcccgtactgaaactgaatactg caacatatacagttgaagcacagtttcatgaatatattcagccaagggtacataaaaatctcactgatttttgtacagag ttgacaggcataactcaaggtatggttgatgttggtattgacattgaggatgtattgaagagatttaatcaatggatgat ggataatagattactggaagaagatgctagttatgcctttgtcacatatggtgactgggatctcaacacaatgttaccac ataactgtgattatttcaaattacctgtccaaggttacttcaagaagtggataaatgtcaagaagtgtgttgccaaggca actggcaaatatcctggaggaatgatgggagcattaaaacagctgaaactgactcatactgggcgtcatcactctggtat tgatgactgtaagaacatttcaaatatagtagtggagttaatgaagcgtggctatatttttgacatcactggaagcaggt ga |
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Protein
| Protein ID | pfu_aug2.0_2109.1_32048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2109.1_32048.t1 MAISLQQSQGAEIKPNQQKFKYLLVLDFEATCKDGEKIEPQEIIEFPVLKLNTATYTVEAQFHEYIQPRVHKNLTDFCTE LTGITQGMVDVGIDIEDVLKRFNQWMMDNRLLEEDASYAFVTYGDWDLNTMLPHNCDYFKLPVQGYFKKWINVKKCVAKA TGKYPGGMMGALKQLKLTHTGRHHSGIDDCKNISNIVVELMKRGYIFDITGSR |
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