Gene
| Gene Model ID | pfu_aug2.0_2109.1_32049 |
|---|---|
| Locus | scaffold2109.1 : 39846 ... 59250 : + |
| To GenomeBrowser | scaffold2109.1:39846..59250 |
| Genes list of scaffold | scaffold2109.1 |
| Synonym | pfu_aug1.0_1777.1_08111 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2109.1_32049.t1 | 1 | 1 | FYVE | 819 | 881 | 9.8e-21 | 73.4 | 4.2e-24 | 2.1e-20 | 72.4 |
| pfu_aug2.0_2109.1_32049.t1 | 1 | 1 | SARA | 892 | 928 | 3.3e-15 | 55.6 | 2.3e-18 | 1.2e-14 | 53.9 |
| pfu_aug2.0_2109.1_32049.t1 | 2 | 1 | DUF3480 | 1157 | 1227 | 0.0 | 254.5 | 7.19987e-42 | 3.6e-38 | 131.1 |
| pfu_aug2.0_2109.1_32049.t1 | 2 | 2 | DUF3480 | 1225 | 1349 | 0.0 | 254.5 | 1.2e-39 | 5.9e-36 | 123.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2109.1_32049.t1 | gi|676477594|ref|XP_009061159.1| | hypothetical protein LOTGIDRAFT_193725 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2109.1_32049.t1 | gi|524903013|ref|XP_005107725.1| | PREDICTED: uncharacterized protein LOC101855213 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2109.1_32049.t1 | gi|148235132|ref|NP_001079166.1| | zinc finger, FYVE domain containing 9 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_2109.1_32049.t1 | gi|213623970|gb|AAI70468.1| | Smad anchor for receptor activation [Xenopus laevis] | 0.0 |
| pfu_aug2.0_2109.1_32049.t1 | gi|632963911|ref|XP_007898142.1| | PREDICTED: zinc finger FYVE domain-containing protein 9 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2109.1_32049.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2109.1_32049.t1 atggatagtctgatagtagatttagataaagtattggatgattttgaagcagaggagaaggcttcatctcagcttcccgg tcaagaaaccaaaccctcagactttgctcattatgtggctttaaaggaggatcgaccttgggaggatcagagtcaagtac cccttgggacagacacaacctggaagctttaccccagtcatgagcataaactcaactcaggagggtatgacgacccctac ataccagtagaaaactttgatctctcggaagctgactttgcaccgtctgtgatcactgctgataagtctcatttgaagat cgagaatgcggttgacaggcagttgaacaatcacttccaaaaagatgaaaacgaaaaaggttacgataaaagtttacaga aaagtgatgttgttataaaatcaaatctttcgtcacaaagggatgatagtttaggtctccctaaaatacagaatagtgaa aaatttcaatacatttctgtaaacaatgctcatatttttgaacagcataatggaactgtagaaaatggaggtgatattca gaatcatgtcataaacaagaatgcaacaaatgaaaaacattccagaccatccggttttggattgtacaatcttccttcac caaatgataaatttcctatacaagcaagagatgaatttacaccagtttatgaaaatcaaccatttccaccggaccttgcc cctgcagtcaatgcaagggcatcaatgaatggatctttaaacgtcatacctgaacatagctacaggtttgatgacagaag tagtttagacagtgacaaacttacacttggtaattctttagatagaatgtcttcagataattcacttataggatctgaca gttcagaaacggtaccaaaaacactttctcaaagcataaatacagagttgaactctcaggcttcctcactgagtcctcat actgaggatagatctgtaaatgacggaagtttggacaattcactgacaactcagtccttgcgggaatcgcagcctctctc tgacagtcaaggtgcagatagcttaagttctaattactacatcgaacctcaaagtccgcaatatgtgttgactgcctcgg aaagtgagaatcaacttcaagattatgagaaaaatgtgaacgaggagaaaatcgaaagtggagatcaaatgaatagggaa gaaatagttgaaacgcaagcaatgaacaaaaatgaccttgatcaggattgtgtctcggaaacgactcagcaaccaaacat atcagatagtagtgttattgttggcttcagtgacatgaatgtggaaatggcagataatgaccttgacagttaccttggtg atgtgacacaggaaagtccttcagaacaaacaagaaatgaagtcgtttccatggagtcatctacatcacagtatgataag atacgcgaaagtagtcctctacagtacggtagtttggaaaactttagatctaatgaaagcaaacaagaagatgtttgtag agagaggagtcctgaatttagtggaaataacaacagtaatctgccaagttacgatcagcttcatcctgatacacttactt gtaactctaattcgactcatgcagccattgaaggttatactagttctgcggtagaaagtgaagtctcaaatgaagagatc agtgtaaagatggatgatacaccacaagagaaaaccaccaacgatcaaagtagtgattctaacgatcaccaatcaccgag taagagaacgttaggatcaggtggggcaagaccgaaagaattgccaaaacaatcaacaggcacaatgccaacaaatgaca gttcaaataatgataatgaatccttgattacaagcagtcagataggtgctagtaatggtatcatggaatgtgccgaaatg acggtagatactgaagtggtatcagatacaaatctaagtggtatccaggtttacccaaaggaaagtcagacggcaccacc tcagactgaggaagagttagacgcagatttagcagcagctatcgccttatcattgaaagacatagagggagaggtggatg ataagtcaataccccaggcacaaaatggtgatgacaccagtccacagaattctgaatctgtggatcaaatatcacttcag caaaggaagcgtcctaacagtctaaatctcccaccacttggagaaggtaactctggtgcagaaaggtcacatgctccata tacttttccctaccccagggagcaggagtccagtgatgttgaacaagttgacacaccagataatgttcctgaggttgtag aggatgaaacaatagctcagtctgttcaagataacatggcaggagcgacaggagtaacgccttcccaagattcctcactc ccgaccaccccaccaccgccatacatgagcaccactctgggtaaaatagcaccgacatggataccggatgctgaagcacc aaactgcatgggttgtgaatctaagtttaccttcaccaaaagaaggcaccattgtagagcttgtggcaaggtcttctgtt ctacgtgttgtaacatgaagagtaagctacagtatatggagaataaggaagcccgagtgtgccacccctgccatcaaacc atgaccatagcggaaatctcaagtcgaactggtcgcggcccgcatcccaataatcccagtgattactgttcaaccattcc tccttcgcagcaagcctcgatcacacctctgtcaccccccacagtcatggtacctgtcggggttctcaaacgagagggta gtcaaagaaaaagtgaaccaaagcatgtgatgttctcagacggaatctgcccaggtggtgatttaacggagctggatggg tctaatgaggcgaccagtaggcttcctccgcgccggtcctcacgtagtcagaggaaagtggagaaaggatcaccagattc caagcatcatgccaggagagtacgagccagtgagagtaagaatctacagtgtctaataccagagacaggactacctcctg tagtgttagccacagatagcaagggggagtacactatggattccaaccctgattcagaaaaatacataccacagatgaaa gaagaagatggggatcctgtggtgtttgctgttaacaacaatttacttatcatggtcaaaatcatatcattggattgctg tgtgaatcgtacatgttggtgctttacctctaagggtatgtgtaatgtaggacaggacgagattgttatagtgttagaga ccctcccggaggagaaagtcatacctagggatatattctgtcattttcatacagtcttcgaggaagctggaaaaggaaac acagtgtcagacatgggtcattccattttcaatcagagtttcctggacagcagagatcatggtggattcctctacataag accaacatttcagtgcctccacaagctcatcctgcccacccctccttatgtatttggtatactcctccagaaatgggaga ctccgtgggcaaaagttttccccatacgacttatgctgagactaggagcagagtatagatactatccctgtccattgatc agtgttaggaacaggaagccggtgttctttgagatcggtcacaccattatgaatctgctggcagatttccgtaattatca tgtgaagagtccaatagatggtatggccatggatggaatagaaagtctacatatccctaatgctacagactatgtaggtg aacataggatggtacggtggactgatgtgttcttcatacagaatctagactcgggatcggctaaatgggaacctgtggac cttagtaaactagctgacaccctggccaatgctacttgtatagctcttacacctcacctagacaaactgagggaagccgc actggttaaaattggcctccgtgttaccatagaaacagaaaaggttggctatgaagttggtgccaatgaagagagattac cagacacgtatatgaacgatctagataatgaactgattcctgttatccatagtgcagcatcacaaaaccatggtggatcc attatcctagaactcgtctttcatgttttagattag |
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Protein
| Protein ID | pfu_aug2.0_2109.1_32049.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2109.1_32049.t1 MDSLIVDLDKVLDDFEAEEKASSQLPGQETKPSDFAHYVALKEDRPWEDQSQVPLGTDTTWKLYPSHEHKLNSGGYDDPY IPVENFDLSEADFAPSVITADKSHLKIENAVDRQLNNHFQKDENEKGYDKSLQKSDVVIKSNLSSQRDDSLGLPKIQNSE KFQYISVNNAHIFEQHNGTVENGGDIQNHVINKNATNEKHSRPSGFGLYNLPSPNDKFPIQARDEFTPVYENQPFPPDLA PAVNARASMNGSLNVIPEHSYRFDDRSSLDSDKLTLGNSLDRMSSDNSLIGSDSSETVPKTLSQSINTELNSQASSLSPH TEDRSVNDGSLDNSLTTQSLRESQPLSDSQGADSLSSNYYIEPQSPQYVLTASESENQLQDYEKNVNEEKIESGDQMNRE EIVETQAMNKNDLDQDCVSETTQQPNISDSSVIVGFSDMNVEMADNDLDSYLGDVTQESPSEQTRNEVVSMESSTSQYDK IRESSPLQYGSLENFRSNESKQEDVCRERSPEFSGNNNSNLPSYDQLHPDTLTCNSNSTHAAIEGYTSSAVESEVSNEEI SVKMDDTPQEKTTNDQSSDSNDHQSPSKRTLGSGGARPKELPKQSTGTMPTNDSSNNDNESLITSSQIGASNGIMECAEM TVDTEVVSDTNLSGIQVYPKESQTAPPQTEEELDADLAAAIALSLKDIEGEVDDKSIPQAQNGDDTSPQNSESVDQISLQ QRKRPNSLNLPPLGEGNSGAERSHAPYTFPYPREQESSDVEQVDTPDNVPEVVEDETIAQSVQDNMAGATGVTPSQDSSL PTTPPPPYMSTTLGKIAPTWIPDAEAPNCMGCESKFTFTKRRHHCRACGKVFCSTCCNMKSKLQYMENKEARVCHPCHQT MTIAEISSRTGRGPHPNNPSDYCSTIPPSQQASITPLSPPTVMVPVGVLKREGSQRKSEPKHVMFSDGICPGGDLTELDG SNEATSRLPPRRSSRSQRKVEKGSPDSKHHARRVRASESKNLQCLIPETGLPPVVLATDSKGEYTMDSNPDSEKYIPQMK EEDGDPVVFAVNNNLLIMVKIISLDCCVNRTCWCFTSKGMCNVGQDEIVIVLETLPEEKVIPRDIFCHFHTVFEEAGKGN TVSDMGHSIFNQSFLDSRDHGGFLYIRPTFQCLHKLILPTPPYVFGILLQKWETPWAKVFPIRLMLRLGAEYRYYPCPLI SVRNRKPVFFEIGHTIMNLLADFRNYHVKSPIDGMAMDGIESLHIPNATDYVGEHRMVRWTDVFFIQNLDSGSAKWEPVD LSKLADTLANATCIALTPHLDKLREAALVKIGLRVTIETEKVGYEVGANEERLPDTYMNDLDNELIPVIHSAASQNHGGS IILELVFHVLD |
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