Gene
| Gene Model ID | pfu_aug2.0_2109.1_32050 |
|---|---|
| Locus | scaffold2109.1 : 64046 ... 79628 : + |
| To GenomeBrowser | scaffold2109.1:64046..79628 |
| Genes list of scaffold | scaffold2109.1 |
| Synonym | pfu_aug1.0_39649.1_70325 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2109.1_32050.t1 | 1 | 1 | Mtp | 90 | 253 | 1.9e-27 | 96.1 | 1.1e-30 | 3.3e-27 | 95.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2109.1_32050.t1 | gi|676477071|ref|XP_009060995.1| | hypothetical protein LOTGIDRAFT_150683 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2109.1_32050.t1 | gi|524902479|ref|XP_005107486.1| | PREDICTED: lysosomal-associated transmembrane protein 4A-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2109.1_32050.t1 | gi|242003562|ref|XP_002422774.1| | lysosomal-associated transmembrane protein, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_2109.1_32050.t1 | gi|189240443|ref|XP_972854.2| | PREDICTED: lysosomal-associated transmembrane protein 4B [Tribolium castaneum] | 3.0e-38 |
| pfu_aug2.0_2109.1_32050.t1 | gi|213511226|ref|NP_001133826.1| | Lysosomal-associated transmembrane protein 4A [Salmo salar] | 1.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_2109.1_32050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2109.1_32050.t1 atgagattgaagtttgactctggagatcagagttcgtttcgctgttgtttctgctgtcatgtcagaactggaactctttt cctgggactcttccacttggtcgttcacttatttgtgatagcagccctggtgtttgcctctattcacccagaagttttac agcaacaggctcctaaatgtccaggagacaatgatggaatcattgtggagtttgacaatggtagtgggtacagatttgaa acagaaagtactgcttttcaaagaaaaatgaccagagaggatctaggcgtggcttttgtcattacaatgtgtatgctgag cgtggtaatattcctattatacggtctcatcaagaacagaccaggatacctactaccatttttctgtatccaagtatttg acttctgtctaagctgtcttactgtagtaggctacttcagctatgctccaaacatcaaaacatggatcaaagaccaggga ctgaactgcttccctggcatggagcatatcatgaaagtagatggacagtggctaatgttgtttggcctccttgtaatggt actcttcctctccttaaaagcatatcttattggaatggtatgggcttgctacagatacttacaaatgaaagtacaaaaca atgcagaaatccgagaatatcatgtagatcctgacactgagatgctgctgccaccaaaatatgaggatgccatcaaacaa tcagctgctactcaatctgcaaaccctcctccagcttacagtgacttgtaa |
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Protein
| Protein ID | pfu_aug2.0_2109.1_32050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2109.1_32050.t1 MRLKFDSGDQSSFRCCFCCHVRTGTLFLGLFHLVVHLFVIAALVFASIHPEVLQQQAPKCPGDNDGIIVEFDNGSGYRFE TESTAFQRKMTREDLGVAFVITMCMLSVVIFLLYGLIKNRPGYLLPFFCIQVFDFCLSCLTVVGYFSYAPNIKTWIKDQG LNCFPGMEHIMKVDGQWLMLFGLLVMVLFLSLKAYLIGMVWACYRYLQMKVQNNAEIREYHVDPDTEMLLPPKYEDAIKQ SAATQSANPPPAYSDL |
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