Gene
| Gene Model ID | pfu_aug2.0_2109.1_32051 |
|---|---|
| Locus | scaffold2109.1 : 81478 ... 102865 : - |
| To GenomeBrowser | scaffold2109.1:81478..102865 |
| Genes list of scaffold | scaffold2109.1 |
| Synonym | pfu_aug1.0_181481.1_42913 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2109.1_32051.t1 | 1 | 1 | Rtf2 | 47 | 333 | 0.0 | 280.8 | 0.0 | 0.0 | 280.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2109.1_32051.t1 | gi|676479063|ref|XP_009061626.1| | hypothetical protein LOTGIDRAFT_219929 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2109.1_32051.t1 | gi|524866601|ref|XP_005090121.1| | PREDICTED: protein RTF2 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_2109.1_32051.t1 | gi|291235299|ref|XP_002737586.1| | PREDICTED: protein RTF2 homolog [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2109.1_32051.t1 | gi|662198668|ref|XP_008472466.1| | PREDICTED: protein RTF2 homolog isoform X1 [Diaphorina citri] | 0.0 |
| pfu_aug2.0_2109.1_32051.t1 | gi|350409571|ref|XP_003488780.1| | PREDICTED: protein RTF2 homolog [Bombus impatiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2109.1_32051.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2109.1_32051.t1 atgcatcgaaacgtttgcgaggaatgtgcttcttttgttccgctgaacaagcgcattcacaacattgacgacagagagaa aagtcaattttgttgtcaaaaattgttttctttctacatatttttgcgtttgatagacatgggatgcgacggaggaacca tcccaaagagggatgaacttgtgcgcactaagaaaaaaccagaacagaaagacaaaacagccgatttggatgctaaatgg aaacattgtgcgataacacaggaaccattgagagagccggtaatggcatgtgaactgggaaggctttacaacaaggagtc agttttggagttccttattgacagaagcaaatttgaatgtgcagcttcatttgaacatctaagaggacttaaagacttga agcagctcaatctgactgagaacaaaggatatgaaagaccacatatagagaagggggatgcctatattgacactcaggat gctaaatacatttgtcctgtggttggcataacaatgaatggtaaacacaagttttgctttatttggtcttgtgggtgtgt tctgtcagaaagggcattaaaggaagttaaaacagatgtctgccacaaatgtgggaaaccccttactacagacaacatca ttatactgaatggtacagaggatgaagtcacatcattacgatccaagatggaggaaaaaagactaaaagcaaagctggaa aagaaagctaagaaggcacagaaacatgcactcagttgtgataagaatggggaatctacaggggattcaacaacagatgg gcccagtgtaaaaaaacacacaaaattagaagaatcatcagcaaaaggaaaattaacgaatggaatacctgtgaaatcct ccaagttaaacggactggctaacggtaaaacagaggataaaacaaaaatctctgtgcagaaggacccatctgcaagttca gcctataaatcgttgttcacatcatctgacaaagcaaagaaacaagggtctgcccactgggtcacatataatcctttcta taactga |
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Protein
| Protein ID | pfu_aug2.0_2109.1_32051.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2109.1_32051.t1 MHRNVCEECASFVPLNKRIHNIDDREKSQFCCQKLFSFYIFLRLIDMGCDGGTIPKRDELVRTKKKPEQKDKTADLDAKW KHCAITQEPLREPVMACELGRLYNKESVLEFLIDRSKFECAASFEHLRGLKDLKQLNLTENKGYERPHIEKGDAYIDTQD AKYICPVVGITMNGKHKFCFIWSCGCVLSERALKEVKTDVCHKCGKPLTTDNIIILNGTEDEVTSLRSKMEEKRLKAKLE KKAKKAQKHALSCDKNGESTGDSTTDGPSVKKHTKLEESSAKGKLTNGIPVKSSKLNGLANGKTEDKTKISVQKDPSASS AYKSLFTSSDKAKKQGSAHWVTYNPFYN |
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