Gene
| Gene Model ID | pfu_aug2.0_211.1_03793 |
|---|---|
| Locus | scaffold211.1 : 81560 ... 89125 : - |
| To GenomeBrowser | scaffold211.1:81560..89125 |
| Genes list of scaffold | scaffold211.1 |
| Synonym | pfu_aug1.0_6408.1_67433 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_211.1_03793.t1 | 3 | 1 | Ank_5 | 9 | 43 | 7.4e-19 | 67.3 | 4.4e-08 | 0.00013 | 22.0 |
| pfu_aug2.0_211.1_03793.t1 | 3 | 1 | Ank_4 | 9 | 56 | 6.8e-14 | 51.9 | 6.5e-09 | 1.9e-05 | 25.0 |
| pfu_aug2.0_211.1_03793.t1 | 3 | 1 | Ank | 10 | 32 | 8.9e-21 | 72.6 | 8.3e-05 | 0.24 | 11.2 |
| pfu_aug2.0_211.1_03793.t1 | 2 | 1 | Ank_2 | 10 | 64 | 5.3e-20 | 71.5 | 3.9e-14 | 1.2e-10 | 41.6 |
| pfu_aug2.0_211.1_03793.t1 | 5 | 1 | Ank_3 | 10 | 31 | 9.8e-12 | 43.9 | 0.00052 | 1.5 | 9.2 |
| pfu_aug2.0_211.1_03793.t1 | 3 | 2 | Ank_5 | 22 | 77 | 7.4e-19 | 67.3 | 2.4e-11 | 7.2e-08 | 32.4 |
| pfu_aug2.0_211.1_03793.t1 | 3 | 2 | Ank | 35 | 67 | 8.9e-21 | 72.6 | 1.1e-13 | 3.1e-10 | 39.3 |
| pfu_aug2.0_211.1_03793.t1 | 5 | 2 | Ank_3 | 35 | 64 | 9.8e-12 | 43.9 | 2.2e-07 | 0.00064 | 19.7 |
| pfu_aug2.0_211.1_03793.t1 | 2 | 2 | Ank_2 | 50 | 111 | 5.3e-20 | 71.5 | 1.7e-12 | 5.0e-09 | 36.3 |
| pfu_aug2.0_211.1_03793.t1 | 3 | 3 | Ank_5 | 55 | 110 | 7.4e-19 | 67.3 | 6.9e-11 | 2.1e-07 | 30.9 |
| pfu_aug2.0_211.1_03793.t1 | 3 | 2 | Ank_4 | 55 | 84 | 6.8e-14 | 51.9 | 1.9e-06 | 0.0058 | 17.1 |
| pfu_aug2.0_211.1_03793.t1 | 3 | 3 | Ank | 71 | 101 | 8.9e-21 | 72.6 | 1.4e-07 | 0.00041 | 20.0 |
| pfu_aug2.0_211.1_03793.t1 | 3 | 3 | Ank_4 | 71 | 110 | 6.8e-14 | 51.9 | 3.5e-08 | 0.00011 | 22.6 |
| pfu_aug2.0_211.1_03793.t1 | 5 | 3 | Ank_3 | 71 | 96 | 9.8e-12 | 43.9 | 3.6e-05 | 0.11 | 12.8 |
| pfu_aug2.0_211.1_03793.t1 | 5 | 4 | Ank_3 | 103 | 110 | 9.8e-12 | 43.9 | 5.0 | 15000.0 | -3.2 |
| pfu_aug2.0_211.1_03793.t1 | 5 | 5 | Ank_3 | 183 | 189 | 9.8e-12 | 43.9 | 5.0 | 15000.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_211.1_03793.t1 | gi|524903616|ref|XP_005108004.1| | PREDICTED: ankyrin repeat and death domain-containing protein 1A-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_211.1_03793.t1 | gi|585671119|ref|XP_006817994.1| | PREDICTED: protein phosphatase 1 regulatory subunit 16A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_211.1_03793.t1 | gi|524903618|ref|XP_005108005.1| | PREDICTED: ankyrin repeat and death domain-containing protein 1A-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_211.1_03793.t1 | gi|676429031|ref|XP_009045468.1| | hypothetical protein LOTGIDRAFT_203408 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_211.1_03793.t1 | gi|514677560|ref|XP_004987666.1| | hypothetical protein PTSG_11307 [Salpingoeca rosetta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_211.1_03793.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_211.1_03793.t1 atgtccgcgcccatgggtgttgctaacgccgccgccaatggggatttaacgttactaaggcaactgctacggcaaggctg tgatgtgaatgagaggtctagagatggcatgactccgctggcacttgcggctttttggggttacgctgatatagtaagct gtcttatcgagaacagggcagacgttaatgcttgtaacaaagggacgttatggacagcccttcactgtgcagccttccaa ggtcacggcaaggtcatcatgaaactcatggaggcaaatccaaatattacgctcaaagacaatcaaggacgcactgctgt tgactttgcctccgcactagatgcaatatggcctttttttgctgcggctggttgcaccagaacaccgaaatcggaattaa tcaggatggacatagtgaagaaggtcaaaacagaggatccatcagtcccgcgatcagattttgctcatttttctcgccct ggatcggcatatgtgatccgcagtcagcctcttcagggagataactctaacagttcaaacatggccatggctgctatgaa cggtgacgtgcttgcaaatatgccagaagaacccgattcgtataactcacggacttacaacccctcactgtctatatgga ataggtga |
|
Protein
| Protein ID | pfu_aug2.0_211.1_03793.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_211.1_03793.t1 MSAPMGVANAAANGDLTLLRQLLRQGCDVNERSRDGMTPLALAAFWGYADIVSCLIENRADVNACNKGTLWTALHCAAFQ GHGKVIMKLMEANPNITLKDNQGRTAVDFASALDAIWPFFAAAGCTRTPKSELIRMDIVKKVKTEDPSVPRSDFAHFSRP GSAYVIRSQPLQGDNSNSSNMAMAAMNGDVLANMPEEPDSYNSRTYNPSLSIWNR |
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