Gene
| Gene Model ID | pfu_aug2.0_211.1_03794 |
|---|---|
| Locus | scaffold211.1 : 94786 ... 114727 : + |
| To GenomeBrowser | scaffold211.1:94786..114727 |
| Genes list of scaffold | scaffold211.1 |
| Synonym | pfu_aug1.0_40446.1_70364 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| activin receptor type-1 isoform x2 | GO:0000166 GO:0001655 GO:0003007 GO:0004702 GO:0005024 GO:0006357 GO:0007179 GO:0007369 GO:0007498 GO:0009855 GO:0009968 GO:0016361 GO:0019838 GO:0023014 GO:0032924 GO:0042692 GO:0043009 GO:0043167 GO:0045778 GO:0045893 GO:0046332 GO:0048179 GO:0048468 GO:0048641 GO:0048646 GO:0051094 GO:0060389 GO:0060485 GO:0060562 GO:0060911 GO:0071385 GO:0090092 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_211.1_03794.t1 | 1 | 1 | Activin_recp | 44 | 126 | 5.9e-07 | 30.0 | 8.1e-10 | 1.7e-06 | 28.5 |
| pfu_aug2.0_211.1_03794.t1 | 1 | 1 | TGF_beta_GS | 207 | 235 | 2.9e-14 | 52.0 | 3.1e-17 | 6.5e-14 | 50.9 |
| pfu_aug2.0_211.1_03794.t1 | 1 | 1 | Pkinase | 238 | 494 | 0.0 | 164.0 | 0.0 | 0.0 | 163.5 |
| pfu_aug2.0_211.1_03794.t1 | 1 | 1 | Pkinase_Tyr | 238 | 449 | 2.7e-32 | 111.8 | 1.7e-35 | 3.7e-32 | 111.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_211.1_03794.t1 | gi|676488736|ref|XP_009064711.1| | hypothetical protein LOTGIDRAFT_53518, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_211.1_03794.t1 | gi|533159129|ref|XP_005393463.1| | PREDICTED: activin receptor type-1 isoform X9 [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_211.1_03794.t1 | gi|533159117|ref|XP_005393457.1| | PREDICTED: activin receptor type-1 isoform X3 [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_211.1_03794.t1 | gi|533159115|ref|XP_005393456.1| | PREDICTED: activin receptor type-1 isoform X2 [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_211.1_03794.t1 | gi|591363651|ref|XP_007056728.1| | PREDICTED: activin receptor type-1 [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_211.1_03794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_211.1_03794.t1 atgagagaagttgtgtttttcttgtttgttggttttactgcaataacaggcttccagccaaacaagaatgtgtcggaatt gatcgccaaacagcagacagaaactgttgacgatgagccactgaactatccgtgcgcgtgttccccttcatttaactgcc atggggatagtgaccattgtaacacgacccgaggtgtagggtgttttgtgttcaaagatgcgacacgtggggaggtcgtc gttcgtaggggatgtggatcgtaccatgagcaacagcagatggtgtgtcggggtcggagacggcagttttggcacgagca gtacgtagccgttctctgctgctccaccccttggtgtaacaagtttgaggatccaccactgaaagttgttcctacggtac ctgtaccagttcagcagcaaaatgaattatgggactggaagatgatattggccattatattccctatagtcgtgctgata tgtacagtgtccgttatattgtgtgtctggctaagatgcctacctaagcgacggcaagagagccaggaaaacctacaagc tcacgaagagctattaccagaagtttatggtggtttgaaggcaacacaagttggtgatagtacattacaggagatcatag accagtcctgtacgtcaggaagtgggtcaggattaccgttcctcgtacaagctacagtcgctcgaagtatcaacctacta gaatgtataggtaaaggaagatatggagaggtttggagagggaaatataacgacgaaaatgtcgccgtcaaaattttctc gtcccgtgatgaagccagctggaaaagagaaaccgagatctacaacacagtgttgttacgtcacgactcgatcctgggtt attacggagctgatatgacgagcaggaattcctgtacgcagctctggcttatcgttcattatcacgaaaacgggtcatta tatgattatctccaaagaactgtgttggattacgaatccatgctacttcttgctcattcagcagcgaacggcttagtgca tctgcactcggaaattcacggaaatcatggtaaaccagccatagctcaccgtgacatcaaatctaaaaatatcctcgtca aaagtaacgggacatgctgtataggggatctaggactagcgtttacgcattcgacagagagtggaaaaatagattacgga tgtaataataaagtgggaactaaacggtacatggcacctgaactgttggaagagacgctgaacgtgaattattttgactc gtttaaagcggtggatgtgtacgcgtttggtctggtattatgggaaatagcaaggaggtgtgaaacaggaggtatggttg aggagtataaaccgccattttgggacgttgtgccgtcagacccctcgtttgaagacatgcgtaaagttgtcgtggtagat cagcaacgacccacgatacctaacagatggagttcagatcagaatattcaaacattataa |
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Protein
| Protein ID | pfu_aug2.0_211.1_03794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_211.1_03794.t1 MREVVFFLFVGFTAITGFQPNKNVSELIAKQQTETVDDEPLNYPCACSPSFNCHGDSDHCNTTRGVGCFVFKDATRGEVV VRRGCGSYHEQQQMVCRGRRRQFWHEQYVAVLCCSTPWCNKFEDPPLKVVPTVPVPVQQQNELWDWKMILAIIFPIVVLI CTVSVILCVWLRCLPKRRQESQENLQAHEELLPEVYGGLKATQVGDSTLQEIIDQSCTSGSGSGLPFLVQATVARSINLL ECIGKGRYGEVWRGKYNDENVAVKIFSSRDEASWKRETEIYNTVLLRHDSILGYYGADMTSRNSCTQLWLIVHYHENGSL YDYLQRTVLDYESMLLLAHSAANGLVHLHSEIHGNHGKPAIAHRDIKSKNILVKSNGTCCIGDLGLAFTHSTESGKIDYG CNNKVGTKRYMAPELLEETLNVNYFDSFKAVDVYAFGLVLWEIARRCETGGMVEEYKPPFWDVVPSDPSFEDMRKVVVVD QQRPTIPNRWSSDQNIQTL |
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