Gene
| Gene Model ID | pfu_aug2.0_211.1_03796 |
|---|---|
| Locus | scaffold211.1 : 148536 ... 154857 : + |
| To GenomeBrowser | scaffold211.1:148536..154857 |
| Genes list of scaffold | scaffold211.1 |
| Synonym | pfu_aug1.0_10950.1_53629 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_211.1_03796.t1 | 1 | 1 | rRNA_processing | 15 | 131 | 6.0e-10 | 39.0 | 2.1e-13 | 7.8e-10 | 38.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_211.1_03796.t1 | gi|676481331|ref|XP_009062341.1| | hypothetical protein LOTGIDRAFT_235139 [Lottia gigantea] | 3.0e-13 |
| pfu_aug2.0_211.1_03796.t1 | gi|260805072|ref|XP_002597411.1| | hypothetical protein BRAFLDRAFT_80592 [Branchiostoma floridae] | 1.0e-11 |
| pfu_aug2.0_211.1_03796.t1 | gi|755925774|ref|XP_011299699.1| | PREDICTED: thyroid transcription factor 1-associated protein 26 homolog [Fopius arisanus] | 1.0e-11 |
| pfu_aug2.0_211.1_03796.t1 | gi|751222072|ref|XP_011164253.1| | PREDICTED: thyroid transcription factor 1-associated protein 26 homolog [Solenopsis invicta] | 3.0e-11 |
| pfu_aug2.0_211.1_03796.t1 | gi|383855714|ref|XP_003703355.1| | PREDICTED: thyroid transcription factor 1-associated protein 26 homolog [Megachile rotundata] | 9.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_211.1_03796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_211.1_03796.t1 atggaggaagggaaagggacaggtcaaggttttgcagacaagcggaagagaaaagccaagtatgagtacatgaaaatttt gaaaaaagagaagaataagatccgagatgaagctgccggatcaagcaaacaaaacagggaggattcaggaatgagaaaat ttcaaccacattcaaacaggtaccataaacagaagaaagaatttgatagtaagaaattagagaaagagaagagaaaacac gaagcgattaaaaagagaaaagaacgcgatgctgctatggaacaatataccaagaaaaagaaagcgaactataagaaaat gtgcaagaaaactcaaagaggacagccgttaatgagagagagaattgaacttttattgagtaaaattgaaaataaatata atcaaacatga |
|
Protein
| Protein ID | pfu_aug2.0_211.1_03796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_211.1_03796.t1 MEEGKGTGQGFADKRKRKAKYEYMKILKKEKNKIRDEAAGSSKQNREDSGMRKFQPHSNRYHKQKKEFDSKKLEKEKRKH EAIKKRKERDAAMEQYTKKKKANYKKMCKKTQRGQPLMRERIELLLSKIENKYNQT |
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