Gene
| Gene Model ID | pfu_aug2.0_211.1_03810 |
|---|---|
| Locus | scaffold211.1 : 390831 ... 405162 : - |
| To GenomeBrowser | scaffold211.1:390831..405162 |
| Genes list of scaffold | scaffold211.1 |
| Synonym | pfu_aug1.0_486.1_65481 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sphingosine-1-phosphate lyase 1-like | GO:0016829 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_211.1_03810.t1 | 2 | 1 | Pyridoxal_deC | 70 | 96 | 2.7e-21 | 75.4 | 1.0 | 3800.0 | -4.1 |
| pfu_aug2.0_211.1_03810.t1 | 2 | 2 | Pyridoxal_deC | 166 | 446 | 2.7e-21 | 75.4 | 1.3e-24 | 5.0e-21 | 74.5 |
| pfu_aug2.0_211.1_03810.t1 | 1 | 1 | Aminotran_5 | 189 | 444 | 5.1e-11 | 41.9 | 5.5e-14 | 2.0e-10 | 39.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_211.1_03810.t1 | gi|676474254|ref|XP_009060087.1| | hypothetical protein LOTGIDRAFT_228978 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_211.1_03810.t1 | gi|524888253|ref|XP_005100702.1| | PREDICTED: sphingosine-1-phosphate lyase 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_211.1_03810.t1 | gi|551487332|ref|XP_005795244.1| | PREDICTED: sphingosine-1-phosphate lyase 1-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_211.1_03810.t1 | gi|432906498|ref|XP_004077561.1| | PREDICTED: sphingosine-1-phosphate lyase 1 isoform X2 [Oryzias latipes] | 0.0 |
| pfu_aug2.0_211.1_03810.t1 | gi|742226508|ref|XP_010899831.1| | PREDICTED: sphingosine-1-phosphate lyase 1 isoform X2 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_211.1_03810.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_211.1_03810.t1 atgtcgaagtacctgggtgccctgacggcaccactggagccatatcttgatattgtcaaaggcaaaataaatggagcatg tgaaggcattgaaccgtggaaggtcgtactgtatgcttgtgggacaacagctgtttgcatatatgttaaaaacatcctga tcagtgatgaagaaactctcacaaagaggaccaaaagggagtttttccgatggatcaaaatgattcccatggtgaaggct cgagtggcagcggagaagaagaaaattcttcatgagatggaggagggaatgcatgctgatgtaccgtcatacatgctgaa attaccttctaaaggtcttacaatggatgaagttatgaaggagttgggagaatataaaaaactgaccaaggtagactggg agaagagtacggtatcagggaccgtgtatagtggtgatcctgatctgaccaagctgatggaaaaaacttatggaatgttt gcatggacaaatcctctacatgcggacatttttcccgatatcagaaaaatggaagctgaggtggttcgaatgtgctgctc cttgtttaacggggattcagaatcttgtggaacaatgacatcaggagggacagagagcatattgatggcttgtttatcat acagaaatatggccagagaaaggggagtcaggatccctgaaatgattgtaccagtcacagtccacgcagcttttgacaag gcagctgcatatttccacatgaagataactcacattccagtagatgaagaaaccagaaaagttgaccttaaagccatgag aagggctattaatgcaaatacatgcatgttggttggatccgcacctcagtttcctcacggagtcattgatgatatcgaag gaatttgtaaactaggagagaagtacaatatcccagtacacgttgattgctgtctgggaggattcttggttccgttcatg gagaaagctggttttcctatccctgttgtcgacttccgtctatcaggagttactagtatctcggcagacacacataagta tgcctttgcaccaaagggatcatctgtgatattatataaaagtcacgactacaggaagcatcagttctttgtacagccag attggcccggcggtatttatgctacagcagctgttggtggcagtagagcaggagctataattgctgtatgctgggccaca cttatgtactttggtgaagatggttatgtacaatctacaaagaaaattatatccaccgccagatatatctgtgaaggcct gagagagatcccaggaatcatggtgtatggggagccacagatgtcagttgtaggattcgggaaagccaaaggttacaagt ataacattttcacattgtctgaaatgttggccaaaaaacggggatggaacctcaatccactacagttcccttcaagcgtt cacttgtgttgtacaatactacatacaaaagaaggagtcgcagacagatttatcacagatgtacgcgagtgtctagagga actactagcttcacctgacgctgaggctggaggcatggctgctatgtatggaatggcccagagtatcccagatcgttcca tggtatctgagcttgccggctgctttgtcgaggctctgtacagtacaaataaagaagaatataagtctaacggagaggtc aaggccaacggtgttgtccattaa |
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Protein
| Protein ID | pfu_aug2.0_211.1_03810.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_211.1_03810.t1 MSKYLGALTAPLEPYLDIVKGKINGACEGIEPWKVVLYACGTTAVCIYVKNILISDEETLTKRTKREFFRWIKMIPMVKA RVAAEKKKILHEMEEGMHADVPSYMLKLPSKGLTMDEVMKELGEYKKLTKVDWEKSTVSGTVYSGDPDLTKLMEKTYGMF AWTNPLHADIFPDIRKMEAEVVRMCCSLFNGDSESCGTMTSGGTESILMACLSYRNMARERGVRIPEMIVPVTVHAAFDK AAAYFHMKITHIPVDEETRKVDLKAMRRAINANTCMLVGSAPQFPHGVIDDIEGICKLGEKYNIPVHVDCCLGGFLVPFM EKAGFPIPVVDFRLSGVTSISADTHKYAFAPKGSSVILYKSHDYRKHQFFVQPDWPGGIYATAAVGGSRAGAIIAVCWAT LMYFGEDGYVQSTKKIISTARYICEGLREIPGIMVYGEPQMSVVGFGKAKGYKYNIFTLSEMLAKKRGWNLNPLQFPSSV HLCCTILHTKEGVADRFITDVRECLEELLASPDAEAGGMAAMYGMAQSIPDRSMVSELAGCFVEALYSTNKEEYKSNGEV KANGVVH |
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