Gene
| Gene Model ID | pfu_aug2.0_2114.1_15410 |
|---|---|
| Locus | scaffold2114.1 : 77816 ... 84044 : + |
| To GenomeBrowser | scaffold2114.1:77816..84044 |
| Genes list of scaffold | scaffold2114.1 |
| Synonym | pfu_aug1.0_234085.1_21529 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| chymotrypsin-like elastase family member 3b | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2114.1_15410.t1 | 1 | 1 | Trypsin | 44 | 277 | 0.0 | 211.0 | 0.0 | 0.0 | 210.8 |
| pfu_aug2.0_2114.1_15410.t1 | 1 | 1 | Trypsin_2 | 75 | 248 | 6.9e-06 | 26.0 | 4.2e-09 | 1.6e-05 | 24.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2114.1_15410.t1 | gi|291399334|ref|XP_002716083.1| | PREDICTED: chymotrypsin-like elastase family member 3B [Oryctolagus cuniculus] | 0.0 |
| pfu_aug2.0_2114.1_15410.t1 | gi|291399338|ref|XP_002716084.1| | PREDICTED: chymotrypsin-like elastase family member 3B [Oryctolagus cuniculus] | 0.0 |
| pfu_aug2.0_2114.1_15410.t1 | gi|432858253|ref|XP_004068868.1| | PREDICTED: elastase-1-like isoform X2 [Oryzias latipes] | 0.0 |
| pfu_aug2.0_2114.1_15410.t1 | gi|736295752|ref|XP_010791324.1| | PREDICTED: elastase-1-like [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_2114.1_15410.t1 | gi|583974930|ref|XP_006782845.1| | PREDICTED: elastase-1-like [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2114.1_15410.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2114.1_15410.t1 atgctgtcatgtgggatgagaaaagcccacccgaagggtctgatttctggtcagggaacgaggcttgccgagttccctga ccagaaaccagaccccgaggcttcgtcgtacagactaccctccggtcgaatcgttaacggtgtggattcggacgctggtc agtggccgtggcaggtgtcactccagtataataacaggggatcatacacgcacatctgtggtggatctctgattgataat aaatgggtactcactgctgctcactgtgtggagtttgacgatagcgtggctaacttccgggtggtgcttggagagcacgt acagtctgaagatcatggcccagaacagataatagccgtgtcacatatcatcatgcataagaattacaacggcggcgcca acggtataccaaatgacatagctcttctgagaatagcattcgctgctgacatcagcaaaccggaaatcggaatcgtgtcc ctgccgagttcagagaaccaagcgttcacagctagtgacaactgttatataagcggatggggaaaaacaagcgcgtcaag cggagcagcggacgtgcttcagcacgtgaaaattgacgttatgaccaacaacgcgtgttcttggcgttggttgttcagcc agacaatccttgacactcatatctgtgttggtggtggtaccgagtcggcttgtaatggtgattccggtggtccgttggtg tgtaacatgggtggggaatgggtgttggccggcgtcacctcctggggatcatccagctgccagaacatgcccaatgtcta caccagagtgtctgagtatcttgattggattgcacggaataaagtagaataa |
|
Protein
| Protein ID | pfu_aug2.0_2114.1_15410.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2114.1_15410.t1 MLSCGMRKAHPKGLISGQGTRLAEFPDQKPDPEASSYRLPSGRIVNGVDSDAGQWPWQVSLQYNNRGSYTHICGGSLIDN KWVLTAAHCVEFDDSVANFRVVLGEHVQSEDHGPEQIIAVSHIIMHKNYNGGANGIPNDIALLRIAFAADISKPEIGIVS LPSSENQAFTASDNCYISGWGKTSASSGAADVLQHVKIDVMTNNACSWRWLFSQTILDTHICVGGGTESACNGDSGGPLV CNMGGEWVLAGVTSWGSSSCQNMPNVYTRVSEYLDWIARNKVE |
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