Gene
| Gene Model ID | pfu_aug2.0_2114.1_15411 |
|---|---|
| Locus | scaffold2114.1 : 87822 ... 91545 : - |
| To GenomeBrowser | scaffold2114.1:87822..91545 |
| Genes list of scaffold | scaffold2114.1 |
| Synonym | pfu_aug1.0_307910.1_28823 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2114.1_15411.t1 | 4 | 1 | zf-C3HC4_2 | 27 | 77 | 4.0e-06 | 26.7 | 3.2e-09 | 4.0e-06 | 26.7 |
| pfu_aug2.0_2114.1_15411.t1 | 4 | 2 | zf-C3HC4_2 | 118 | 149 | 4.0e-06 | 26.7 | 1.4 | 1700.0 | -0.9 |
| pfu_aug2.0_2114.1_15411.t1 | 4 | 3 | zf-C3HC4_2 | 181 | 207 | 4.0e-06 | 26.7 | 1.0 | 1300.0 | -0.5 |
| pfu_aug2.0_2114.1_15411.t1 | 4 | 4 | zf-C3HC4_2 | 606 | 614 | 4.0e-06 | 26.7 | 1.6 | 1900.0 | -1.1 |
Transcript
| Transcript ID | pfu_aug2.0_2114.1_15411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2114.1_15411.t1 atgttgttagcggtgggttctttccatgaactgttaaatatggcatcctccgttgaagcacaattggatttgactcgttg ctcgatttgctttgagatttttaatttaccaaaacagcttccatgtctacatagtttctgtcagatttgtttacagtcgt atatcacggaagtgttcaacaaggactcttcaaatatttcaaatatcaagggaattcattgtccgatttgtagagctttc atcaacaaaccagattatcaagactttcaaaaatggggcaaaacttttcctacaaatcatcttatgaacaatatcattga ttacacaaagtctaaaaccgaaagtaaacattgcaacgtctgtgagagagaaaacgaaagtaaacctgcatcgcattggt gcgtgaattgctgtgatgctttttgtggtccttgcgagcggcaacatagaagatttaaagtaacagctttacataagata gtagaaattggcaaaatgaaagaatcggaatctgaagggcttttgtatggtgctgaagtattttgtgaggaacatcgaag tgaaagcatacgattttactgcgccgaccataaaagcgtgtgttgcatgacatgtatgatgctacgtcatcgtaaatgtg atgacgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggtccgtcgaggatgg agcaaaggccttgaagacttctaaagaggtgaaagaattggaatcagattttaaaggcttgaaaacacaatttgaggagc ttgtgcagaacagggaagaaaacattcagagcttcacagcccatcttgcagagaccgaaggaaaaattgaaacgtcattt aatgaactgattaatcatttcgaaacaagcaagctcgaaatcctagaagaacttggagcaaagaaaaaagaagtaattcc acgacttcaggatgaaaaatcagagcttgagtgcaaaggagccgggatagcaaatgatatagctatctttgaatcaactt ctctctttgcaccaccagcacggtaccttcaaacagtgagaagtttactggagcaacgtgaaaaactggaaactgaactg aataaacaaagaagtcagttgagaaaccataatctggagtacaaacgaaacagaattatggatatcattaagaagactac aaatctcatcggaactgtttcagttttgcaaaaggaaatagtttcaacacagtgtgtccgcctaggaaccgaccatgtaa aaggggaagatgatgacacacatgtttggactcgagtaaaattgaagaataaaatacaagtcgaaggcgacgtcactggg gttgcatatgttgatgataaccgtgtcatcggatcgtctggagatagaactttgactctcttccatatgaatggtacccc attgaattcagtagaattttcaaatccattctggtcagtacgcatgaaaaatcatcaagagggagctgtcgtgatagaaa gaaaatgtctgcagtttttcacaattgtaggaaatcaaattattctaacggctagacttggacaattacatgaaaatatt aaatctgcaatggatcttgcctttgttaagaagaaggatctatttatcggccgcaacgagatctgggttctggataatgc attgagtctagtgcgaggaatcgctgttgaacatagtataggattcatggacgtttgtgatggacactttatttgttaca cgtcgtatgatgaggatactctctactgtgtcggtctagatggaaagcaactattttcttacactcacgaaaagctaaaa gacgcaaccggtgttacggtggattcacgtgggcagatctacgtttgtggttacgcatctagcaacattcaccagcttaa ccacgagggaaaactacagagaatcatttttgaagacctgccttctggtccgtactgtatgcgcttcaatgatgctgaag ataaagtcgctattggatgtcgcgaatgtgtcctcttatacgaattttgctga |
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Protein
| Protein ID | pfu_aug2.0_2114.1_15411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2114.1_15411.t1 MLLAVGSFHELLNMASSVEAQLDLTRCSICFEIFNLPKQLPCLHSFCQICLQSYITEVFNKDSSNISNIKGIHCPICRAF INKPDYQDFQKWGKTFPTNHLMNNIIDYTKSKTESKHCNVCERENESKPASHWCVNCCDAFCGPCERQHRRFKVTALHKI VEIGKMKESESEGLLYGAEVFCEEHRSESIRFYCADHKSVCCMTCMMLRHRKCDDVXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXGSVEDGAKALKTSKEVKELESDFKGLKTQFEELVQNREENIQSFTAHLAETEGKIETSF NELINHFETSKLEILEELGAKKKEVIPRLQDEKSELECKGAGIANDIAIFESTSLFAPPARYLQTVRSLLEQREKLETEL NKQRSQLRNHNLEYKRNRIMDIIKKTTNLIGTVSVLQKEIVSTQCVRLGTDHVKGEDDDTHVWTRVKLKNKIQVEGDVTG VAYVDDNRVIGSSGDRTLTLFHMNGTPLNSVEFSNPFWSVRMKNHQEGAVVIERKCLQFFTIVGNQIILTARLGQLHENI KSAMDLAFVKKKDLFIGRNEIWVLDNALSLVRGIAVEHSIGFMDVCDGHFICYTSYDEDTLYCVGLDGKQLFSYTHEKLK DATGVTVDSRGQIYVCGYASSNIHQLNHEGKLQRIIFEDLPSGPYCMRFNDAEDKVAIGCRECVLLYEFC |
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