Gene
| Gene Model ID | pfu_aug2.0_213.1_10443 |
|---|---|
| Locus | scaffold213.1 : 114416 ... 119831 : + |
| To GenomeBrowser | scaffold213.1:114416..119831 |
| Genes list of scaffold | scaffold213.1 |
| Synonym | pfu_aug1.0_2871.1_23095 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histidine triad nucleotide-binding protein 3-like | GO:0003824 GO:0005737 GO:0008152 GO:0043231 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_213.1_10443.t1 | 1 | 1 | DcpS_C | 7 | 117 | 2.4e-31 | 108.3 | 3.9e-35 | 2.9e-31 | 108.0 |
| pfu_aug2.0_213.1_10443.t1 | 1 | 1 | HIT | 20 | 109 | 3.4e-09 | 37.1 | 1.5e-12 | 1.1e-08 | 35.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_213.1_10443.t1 | gi|676481245|ref|XP_009062311.1| | hypothetical protein LOTGIDRAFT_194459 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_213.1_10443.t1 | gi|524880088|ref|XP_005096712.1| | PREDICTED: histidine triad nucleotide-binding protein 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_213.1_10443.t1 | gi|662220160|ref|XP_008484199.1| | PREDICTED: histidine triad nucleotide-binding protein 3-like [Diaphorina citri] | 2.94273e-44 |
| pfu_aug2.0_213.1_10443.t1 | gi|662220156|ref|XP_008484197.1| | PREDICTED: histidine triad nucleotide-binding protein 3-like [Diaphorina citri] | 5.99756e-43 |
| pfu_aug2.0_213.1_10443.t1 | gi|557001717|ref|XP_006003338.1| | PREDICTED: histidine triad nucleotide-binding protein 3 [Latimeria chalumnae] | 3.99931e-42 |
Transcript
| Transcript ID | pfu_aug2.0_213.1_10443.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_213.1_10443.t1 atggatgggaacatggagagatgtattttctgtaaaatagcagccaagaatgatcccaaaacacaaatcttatatgagga caatgaatttgttgtgttcaaagacataaaaccagctgccacacatcattatttggttattaccaaagttcacataaagg accctaagcagctaaatggaggtcatattgacctagtggagaaaatggttgctgttggtaacagaattttggaagataaa catgctgatgtacaaaattccagatttggttttcactggccaccattcacatctgtgcagcatctacatctccatgcaat atctccaaccacagagatgggattcataggaaagggaatattctcacctaactcattctggtttgtaacgtatgtcatca actcacacttgtttgaaacagtatgtcatcaactcattctggtttgtaagagagtgtaa |
|
Protein
| Protein ID | pfu_aug2.0_213.1_10443.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_213.1_10443.t1 MDGNMERCIFCKIAAKNDPKTQILYEDNEFVVFKDIKPAATHHYLVITKVHIKDPKQLNGGHIDLVEKMVAVGNRILEDK HADVQNSRFGFHWPPFTSVQHLHLHAISPTTEMGFIGKGIFSPNSFWFVTYVINSHLFETVCHQLILVCKRV |
|