Gene
| Gene Model ID | pfu_aug2.0_213.1_10446 |
|---|---|
| Locus | scaffold213.1 : 252987 ... 266941 : - |
| To GenomeBrowser | scaffold213.1:252987..266941 |
| Genes list of scaffold | scaffold213.1 |
| Synonym | pfu_aug1.0_5177.1_45131 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lethal malignant brain tumor-like protein 3 | GO:0009987 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_213.1_10446.t1 | 3 | 1 | MBT | 865 | 920 | 0.0 | 252.3 | 3.7e-25 | 1.4e-21 | 76.2 |
| pfu_aug2.0_213.1_10446.t1 | 3 | 2 | MBT | 960 | 1024 | 0.0 | 252.3 | 4.8e-29 | 1.8e-25 | 88.6 |
| pfu_aug2.0_213.1_10446.t1 | 3 | 3 | MBT | 1063 | 1129 | 0.0 | 252.3 | 8.5e-29 | 3.2e-25 | 87.8 |
| pfu_aug2.0_213.1_10446.t1 | 2 | 1 | zf-C2HC | 1135 | 1165 | 1.4e-28 | 98.3 | 3.3e-16 | 1.2e-12 | 47.2 |
| pfu_aug2.0_213.1_10446.t1 | 2 | 2 | zf-C2HC | 1215 | 1243 | 1.4e-28 | 98.3 | 5.1e-19 | 1.9e-15 | 56.2 |
| pfu_aug2.0_213.1_10446.t1 | 1 | 1 | SAM_1 | 1357 | 1421 | 2.0e-13 | 50.2 | 9.3e-17 | 3.4e-13 | 49.5 |
| pfu_aug2.0_213.1_10446.t1 | 1 | 1 | SAM_2 | 1357 | 1420 | 7.5e-07 | 28.9 | 3.8e-10 | 1.4e-06 | 28.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_213.1_10446.t1 | gi|585641975|ref|XP_006811109.1| | PREDICTED: lethal(3)malignant brain tumor-like protein 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_213.1_10446.t1 | gi|632967178|ref|XP_007899832.1| | PREDICTED: lethal(3)malignant brain tumor-like protein 1 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_213.1_10446.t1 | gi|632967176|ref|XP_007899831.1| | PREDICTED: lethal(3)malignant brain tumor-like protein 1 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_213.1_10446.t1 | gi|524914495|ref|XP_005112062.1| | PREDICTED: lethal(3)malignant brain tumor-like protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_213.1_10446.t1 | gi|632962646|ref|XP_007897437.1| | PREDICTED: lethal(3)malignant brain tumor-like protein 3 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_213.1_10446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_213.1_10446.t1 atgagttcttcacaatccccaggtcattcaggaagtgatgagcctccagccaaaaagcaagctacagacgcggcaaggca ggctaacatgcaagggatggtcactaccactatacctcaaggcatgctggccactgtcaagggacttggtaactacaaca gaaccattaggataactaatcctgagactctacatctccgaggccccagcacgtccgcaaccacgacattcttcactcaa aatcctgtccagcagtcaggctcctcgatcactgtccgtcctaatatggttgccttggcaatgggtcgtcctggataccc tctgcagacaatacaggcattgcacaaaggtcaaatacagcttcaacaaggccaacccaataaagcaggacagataactc taggtacagtaccgttgacacaactctctcagacccctctcacccaatcacaacccagtggtaacacagtacaggtaaca cagaaggcgatcccacagactgtgtccaaacaagctgtccagacggcacaagtcatgcagaaaaaggtccacaaagcttc atctctggtcaatctacagaacaagggtagccagcagtttgtggtgtcccagttaccgaccctggctcaattgaacacca agacgacgatgggaatcacacagcctacaacaggaggaatatcacagcagacatttacactccgacctgtcaaacgtatg ccagttccaatcagtatgcctggaggacagcaaatgtaccaagcacagatccgtatccaaggaaatgtagcgacagaaat caaacctcctggacagaacgatggttctaagtcacctggcagtgctggaaatcagtacttcactgtcctacagaaaccta acacctcacagcctgtcaatcctgtcaatcactccaacataactataatacagaatcctacagtatcatcacccatcaca cccaaagctttaacacagcagcctgccactttctccctcatccagaagccggtctcacaatccagtaagcctgggcaaca ggttccttactcaccaagcctacagaaatccccacatcccatgatgaatcaaactcttcctaacttctcaatcatacaga agccgaattccactcaggctcagatggtagtatcacctcagattttacagtctacgtcaaatccgctaacaaaaggttgt gttgtggtgcaacaggcatcatcaacacagccatcagcatataagcaggacattaattcacgaaagacaccacctgtaag tgttcaaacttatgagacttctcctcagcaggctgttactgaaatcaaatttcagattccgcctcagctacagaaaccag aatttgtcagtatgaaacccagtactgtaaatggtacagataaagaatctggaaatataccggccacagtgttaacatca ggaatgtcagaaaatgccaaaagtgttcgagaaatagttgcaactggtgaaaatttacttgaggacttggaaaaatttac aaaggaaacttcgagtcaatcagctgacaatgtacagagaagtggtgctaaggaggaatctgttgaaaatgttcaaaact cagaaaaaagcagcaaaaatgatgggaaatcaaaagtaaactcatcagataaatctaactcaaatactactcaagaaaat acgtcaaattctgtagagaaaatggatgttgattcaaaattagaacctaaaatagagagtgacaaacaacatgacaagaa cgatagtgtcaaagttgacaaagcagaatcagatgataaaacaggagtgaaagataaagtggaaaagacagaggaaaaaa gtgaaaaatgtgactctacctcagccaaatcctctgaagatggagagtccgtgaagagtgaaacgttatctaaacaggga gagaataagaacagtggtcagtcaggtatagacgatcctgccataacgtctaccaccacatacgactatgatggaatgga gtggaaggacggagtaggcacgctggaaggcagtgatctgaagttcagactgaatgagtttggaggaattgaggtgatct cggaggaccttacatgtaacgagactttagactcgagttcagagttggatgctccaaatccaataaagtcggaatctgaa gagaaacctgatgcaagtggtgataacactaaagctgatacaggttcctctgaaattaaagaagaggcaatggaggaaga catagatgaaaataagaaagatgaagtatgtcagtgtgaaaactgtggagagtatggcttctatagtgaatttattaaat caggtcgtttctgcggacatcactgctctacgctgtacgctgccaagaaagcaaagggagagaaatccgcatattcggca aaaatgtggaagaagaaaaagcagatgttaggaaaaggtctagattcaagtgaactccttaaaccaggacctggacgtaa accgaagaatatgaactggtcgacttacctggagagaactaactctgtaggagcacctcatagactgtttaaagagcctt tccctgctaccaagaatggatttaaggttggtatgaagcttgagggggtggatcccaaacaccagtccctgttctgtgtg atgacggtggtggagatctgtggatacaggatacggttacactttgacggatactccgagtgttatgacttctggaccaa tgccgactcggcttacatcttccctgttggatttaccacagatggttttaactggacaaattacctgaagttagccaagg ctacacctgcccctaaacagctcttcaacaatctgccgataccacctgtgacacctcatggtttccgtattggacataaa ctggaggcagtagataagaagaacagtaccctgacgtgcgctacgacaatagtggatacgatgggagataagatcctgat tcgttttgacggttgggaggatacgtacgattattggtgtgatgtatcatcacctaacatacatcctgtcggctggtgtg aagagaacgacaaacctctctctcctcctggagaggagtatgagaagacaccatttcattggaaggattacttggcaaaa acaaacacacaagctgttccaagcaggttcttcaagcctagagaacctcttggatttgaaaaaggaatgaaactggaatg tacagacaagagaaatccaattctgatacgtgttgccacggtagcagatattgattgtcacatgatacgtattcactttg acggctgggacgattgttacgattattgggtcgaggatgattcctctgagatacacccacctggatggtgtcacaaaact ggtcaccccctgtctccacctccagatttagttccaggaccctcagggtgccccactccaggctgtaaaggaatcggtca tattaaaggtgctaaatatacaggacatcatagtgcttttggatgtccttactcaccgctcaacatgaatagagagtcaa ctctccaggataggttagggtctaccagagctgaggaggtgattagaaccccctctccctccccctcgggcttttctaat aaaccaatggatgtagactctgctccaccttcaccagaggataagaaatgtccgactccaggatgcgatggatctggtca tgtgacagggaaatttacgtcacattacaaactgtcaggctgtcctcttgtatctaacaatcaagtcccatacttcaaca gtcaacctgccccagaacccaccaaacctccggtacgcgtcaagtcaacaaggggcaggaaacccaggagctattatctt aacttaggagaaagaatgccaccatccatgctacagaaagaaaagatcaagactgagagagctcaccacactgacaatgt tcaaccccatgatacgttacaaaacggtgtccatgaatcagtatttgcctcagcaatgcagacaaaacctgtcaaagatt ttcctctttgttgggagcaacattctaaactcttaccgggcgttgacaaagtcaaaggctcggaagtatccaagtggagc attgatcaagtcgctcagttcgttaaaaacttgccaggatgtgaagattactcaaaaacattcaaagaacagcaaataga cggtgaagcattcatgcttataacacagactgacctagtgaaaattctggaaatcaagcttggtcctgcgctcaaaatct acaacagtcttcttgtactcaaaaattcacaagatgtgtgcgatagttgttataatgttgtggacaatctgtcagaatga |
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Protein
| Protein ID | pfu_aug2.0_213.1_10446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_213.1_10446.t1 MSSSQSPGHSGSDEPPAKKQATDAARQANMQGMVTTTIPQGMLATVKGLGNYNRTIRITNPETLHLRGPSTSATTTFFTQ NPVQQSGSSITVRPNMVALAMGRPGYPLQTIQALHKGQIQLQQGQPNKAGQITLGTVPLTQLSQTPLTQSQPSGNTVQVT QKAIPQTVSKQAVQTAQVMQKKVHKASSLVNLQNKGSQQFVVSQLPTLAQLNTKTTMGITQPTTGGISQQTFTLRPVKRM PVPISMPGGQQMYQAQIRIQGNVATEIKPPGQNDGSKSPGSAGNQYFTVLQKPNTSQPVNPVNHSNITIIQNPTVSSPIT PKALTQQPATFSLIQKPVSQSSKPGQQVPYSPSLQKSPHPMMNQTLPNFSIIQKPNSTQAQMVVSPQILQSTSNPLTKGC VVVQQASSTQPSAYKQDINSRKTPPVSVQTYETSPQQAVTEIKFQIPPQLQKPEFVSMKPSTVNGTDKESGNIPATVLTS GMSENAKSVREIVATGENLLEDLEKFTKETSSQSADNVQRSGAKEESVENVQNSEKSSKNDGKSKVNSSDKSNSNTTQEN TSNSVEKMDVDSKLEPKIESDKQHDKNDSVKVDKAESDDKTGVKDKVEKTEEKSEKCDSTSAKSSEDGESVKSETLSKQG ENKNSGQSGIDDPAITSTTTYDYDGMEWKDGVGTLEGSDLKFRLNEFGGIEVISEDLTCNETLDSSSELDAPNPIKSESE EKPDASGDNTKADTGSSEIKEEAMEEDIDENKKDEVCQCENCGEYGFYSEFIKSGRFCGHHCSTLYAAKKAKGEKSAYSA KMWKKKKQMLGKGLDSSELLKPGPGRKPKNMNWSTYLERTNSVGAPHRLFKEPFPATKNGFKVGMKLEGVDPKHQSLFCV MTVVEICGYRIRLHFDGYSECYDFWTNADSAYIFPVGFTTDGFNWTNYLKLAKATPAPKQLFNNLPIPPVTPHGFRIGHK LEAVDKKNSTLTCATTIVDTMGDKILIRFDGWEDTYDYWCDVSSPNIHPVGWCEENDKPLSPPGEEYEKTPFHWKDYLAK TNTQAVPSRFFKPREPLGFEKGMKLECTDKRNPILIRVATVADIDCHMIRIHFDGWDDCYDYWVEDDSSEIHPPGWCHKT GHPLSPPPDLVPGPSGCPTPGCKGIGHIKGAKYTGHHSAFGCPYSPLNMNRESTLQDRLGSTRAEEVIRTPSPSPSGFSN KPMDVDSAPPSPEDKKCPTPGCDGSGHVTGKFTSHYKLSGCPLVSNNQVPYFNSQPAPEPTKPPVRVKSTRGRKPRSYYL NLGERMPPSMLQKEKIKTERAHHTDNVQPHDTLQNGVHESVFASAMQTKPVKDFPLCWEQHSKLLPGVDKVKGSEVSKWS IDQVAQFVKNLPGCEDYSKTFKEQQIDGEAFMLITQTDLVKILEIKLGPALKIYNSLLVLKNSQDVCDSCYNVVDNLSE |
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