Gene
| Gene Model ID | pfu_aug2.0_213.1_10452 |
|---|---|
| Locus | scaffold213.1 : 369661 ... 382863 : - |
| To GenomeBrowser | scaffold213.1:369661..382863 |
| Genes list of scaffold | scaffold213.1 |
| Synonym | pfu_aug1.0_11292.1_53682 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_213.1_10452.t1 | 2 | 1 | TPR_11 | 49 | 113 | 5.7e-10 | 38.7 | 4.2e-11 | 4.8e-08 | 32.5 |
| pfu_aug2.0_213.1_10452.t1 | 3 | 1 | TPR_19 | 63 | 127 | 9.9e-06 | 25.8 | 1.9e-05 | 0.021 | 15.1 |
| pfu_aug2.0_213.1_10452.t1 | 3 | 2 | TPR_19 | 126 | 140 | 9.9e-06 | 25.8 | 1.1 | 1200.0 | -0.2 |
| pfu_aug2.0_213.1_10452.t1 | 2 | 2 | TPR_11 | 146 | 172 | 5.7e-10 | 38.7 | 0.01 | 12.0 | 5.6 |
| pfu_aug2.0_213.1_10452.t1 | 3 | 3 | TPR_19 | 147 | 170 | 9.9e-06 | 25.8 | 0.0027 | 3.1 | 8.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_213.1_10452.t1 | gi|524884818|ref|XP_005099025.1| | PREDICTED: uncharacterized protein C8orf76 homolog [Aplysia californica] | 6.0e-30 |
| pfu_aug2.0_213.1_10452.t1 | gi|742140719|ref|XP_010878739.1| | PREDICTED: uncharacterized protein C8orf76-like [Esox lucius] | 8.0e-27 |
| pfu_aug2.0_213.1_10452.t1 | gi|213511696|ref|NP_001134945.1| | CH076 protein [Salmo salar] | 3.0e-26 |
| pfu_aug2.0_213.1_10452.t1 | gi|641705550|ref|XP_008141631.1| | PREDICTED: uncharacterized protein C8orf76-like [Eptesicus fuscus] | 5.0e-26 |
| pfu_aug2.0_213.1_10452.t1 | gi|558114257|ref|XP_006086393.1| | PREDICTED: uncharacterized protein C8orf76 homolog [Myotis lucifugus] | 2.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_213.1_10452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_213.1_10452.t1 atggagcttggactagactttgaagatgacgactttgttgataagaataaaactgggaagaaaggaccgctgacctccta caatgccaaagtctgcagtccgtattggtacaacaaagcggaggtcactgatcccgaaacagctgccactgtgttcaaat tcaagggagataacttgtttttccggaagaattactcagaggcttcagagtgctaccgacatgggctggataatctgccg gagtcaaaccgctgtatgagacaggacttaagagaatctctcgctaggtgttacatgtacatgaataaaactgcagaggc tctacagcttgctcatactctggtagagaaggcttctaatacagacatgagtttgcaggcattgactttactgcagcaaa tacagcatcattttcaggattataatggtgaagaagacactttgaaacaactgcttgtactccatccatttaatgtacag ttgtggatgaagcttgcccaatgctaccatctgttgtatagtcagttatgtcccttgccatgcggatcaagagaacatgt ccaaattttaacttgtctagtcagagcaaggttattgataaggagcgtgcgtttctctgttggatcatttataaaggaaa aataccagaaacttttagagaagcatgtaggggaagatatttttactttggaccaaaccaaagaggaagaagatactaac cagagtgtgttactaacagaccacaatgactttgatgacagatggtttggatggtctacaacatga |
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Protein
| Protein ID | pfu_aug2.0_213.1_10452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_213.1_10452.t1 MELGLDFEDDDFVDKNKTGKKGPLTSYNAKVCSPYWYNKAEVTDPETAATVFKFKGDNLFFRKNYSEASECYRHGLDNLP ESNRCMRQDLRESLARCYMYMNKTAEALQLAHTLVEKASNTDMSLQALTLLQQIQHHFQDYNGEEDTLKQLLVLHPFNVQ LWMKLAQCYHLLYSQLCPLPCGSREHVQILTCLVRARLLIRSVRFSVGSFIKEKYQKLLEKHVGEDIFTLDQTKEEEDTN QSVLLTDHNDFDDRWFGWSTT |
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