Gene
| Gene Model ID | pfu_aug2.0_213.1_10453 |
|---|---|
| Locus | scaffold213.1 : 382964 ... 388729 : + |
| To GenomeBrowser | scaffold213.1:382964..388729 |
| Genes list of scaffold | scaffold213.1 |
| Synonym | pfu_aug1.0_11292.1_53683 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| intraflagellar transport protein 27 homolog | GO:0005525 GO:0007264 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_213.1_10453.t1 | 1 | 1 | Ras | 2 | 134 | 6.3e-31 | 106.9 | 2.4e-34 | 7.2e-31 | 106.7 |
| pfu_aug2.0_213.1_10453.t1 | 2 | 1 | Miro | 7 | 89 | 2.3e-09 | 37.7 | 1.5e-12 | 4.5e-09 | 36.8 |
| pfu_aug2.0_213.1_10453.t1 | 2 | 2 | Miro | 117 | 126 | 2.3e-09 | 37.7 | 2.7 | 8100.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_213.1_10453.t1 | gi|524872414|ref|XP_005092969.1| | PREDICTED: intraflagellar transport protein 27 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_213.1_10453.t1 | gi|676490635|ref|XP_009065334.1| | hypothetical protein LOTGIDRAFT_108201 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_213.1_10453.t1 | gi|585676652|ref|XP_006819001.1| | PREDICTED: intraflagellar transport protein 27 homolog isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_213.1_10453.t1 | gi|291233682|ref|XP_002736780.1| | PREDICTED: intraflagellar transport protein 27 homolog isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_213.1_10453.t1 | gi|260787384|ref|XP_002588733.1| | hypothetical protein BRAFLDRAFT_238332 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_213.1_10453.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_213.1_10453.t1 atgacaactggcgtggaacttcttgtgaagttggtcaatatcccagacagtaaagataaagtagaattgtatatgtttga ctctgcagggaaggaaatattttcggaccttgtgcaaaaattttgggaacagccgtctgttgtgatggtagtatatgatg tcacaagtgaagtgtcattctcaagctgtgcaaaatggctggaacgagttcgctgtcagaaaccagagacaaaactccca ggtgttgtagttgcaaacaaaacagatcttgatgaacgacgaataatcagccccaaagctggtatggagtttgctgagag caatggtctgaaatattttgaatgttcagcaaaagagatgcagaatgttgacgctgccttctattacctcgctaatgagt tctacaaactttaccaagagaaagtcgagatatttaaaacgatgtcatag |
|
Protein
| Protein ID | pfu_aug2.0_213.1_10453.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_213.1_10453.t1 MTTGVELLVKLVNIPDSKDKVELYMFDSAGKEIFSDLVQKFWEQPSVVMVVYDVTSEVSFSSCAKWLERVRCQKPETKLP GVVVANKTDLDERRIISPKAGMEFAESNGLKYFECSAKEMQNVDAAFYYLANEFYKLYQEKVEIFKTMS |
|