Gene
| Gene Model ID | pfu_aug2.0_2134.1_15422 |
|---|---|
| Locus | scaffold2134.1 : 35926 ... 52853 : + |
| To GenomeBrowser | scaffold2134.1:35926..52853 |
| Genes list of scaffold | scaffold2134.1 |
| Synonym | pfu_aug1.0_46767.1_56001 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| caspase- partial | GO:0004175 GO:0005515 GO:0005737 GO:0006508 GO:0008234 GO:0009966 GO:0042981 GO:0043229 GO:0043234 GO:0044267 GO:0048522 GO:0048731 GO:0097191 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2134.1_15422.t1 | 2 | 1 | DED | 34 | 97 | 1.1e-27 | 95.9 | 1.5e-12 | 7.4e-09 | 35.6 |
| pfu_aug2.0_2134.1_15422.t1 | 2 | 2 | DED | 98 | 176 | 1.1e-27 | 95.9 | 3.7e-20 | 1.8e-16 | 59.9 |
| pfu_aug2.0_2134.1_15422.t1 | 1 | 1 | Peptidase_C14 | 548 | 713 | 1.2e-21 | 77.5 | 4.4e-25 | 2.2e-21 | 76.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2134.1_15422.t1 | gi|260819622|ref|XP_002605135.1| | hypothetical protein BRAFLDRAFT_194931 [Branchiostoma floridae] | 3.00004e-41 |
| pfu_aug2.0_2134.1_15422.t1 | gi|723537163|ref|XP_010302726.1| | PREDICTED: caspase-8, partial [Balearica regulorum gibbericeps] | 2.0e-39 |
| pfu_aug2.0_2134.1_15422.t1 | gi|543740970|ref|XP_005511366.1| | PREDICTED: caspase-8-like [Columba livia] | 3.0e-39 |
| pfu_aug2.0_2134.1_15422.t1 | gi|697510146|ref|XP_009682548.1| | PREDICTED: caspase-8 [Struthio camelus australis] | 2.0e-38 |
| pfu_aug2.0_2134.1_15422.t1 | gi|704290263|ref|XP_010175932.1| | PREDICTED: caspase-8, partial [Caprimulgus carolinensis] | 4.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_2134.1_15422.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2134.1_15422.t1 atgatggatgaaatagatggaccaaaccctgactatactgaatgtatatatggtgtaaaacctggatttcaagaagttcg atccggtgtcgactggacaagatgtttaatagaagtagacagtggactggacgaaggtgatgttgaacaacttaaattcc tattacgaggatgtattagtgatgcgagacttaaaaaactgtcgtgtggaacagagatttttcaggaacttcacaattct ggatatatagacatcgataatggaagtttggacattttggaagaatgtttggtgatgctgtttgaaattggagaggacat tgatgaatctgaatttaagtcggccatttttgctctaggatcggttgtcccaaaaggtcaacttcaaaagatggactccg ttcttgaccttttcatttatctagagaaaaaagatgaactttctcatgaaaatgtggaaattctgccaaaagtgttacat gccatagacagaggagatttattggagaaagttaggcagtataaaaacaattacaacagtacttctaatgtgaacaatgc accattacgggtaacacttcctccgtcaagaccgcaacatcagcagcatcaacaacaccatccttatcaacaccagcaac ctctgctgcgtcatcagcaaccactgcctcctcaacaacatggttaccaacaacaagcgttcgttcgtccaatggttcct acatatcaacaaatgccaaattgtctgcagtacgaagaaatggaatctgaaccgagaactccgctcactgcaggaactga gtcagtcagttcacaggaaggcatggaatttgggtcatctaaaaataaacctccgtctgtccagcgtcagctatcaataa atgtattcctccatcttgcacctattgttgctaagaaaccaaactgggagcagattctgatagacttgggcttaacgaaa accgatttagattccattcgcagaaagtcatcaccagaggtattcaagattgtcaatgacgcattgctgtattggcggga taaagtgatgaagaatagcgaggaatgttctaaaagactgatagacgttttacagaggagtggaattcaagcatcactga cgggaacggggttaaatttggccccaacatcacgacctggtactgcagaaaacgatgaaccgactccagtgagacctttt gttccgccatcggaaaatctctcaagtcgcacccagccccctccgactccaccggagacggacagacgagtcacggagat ggaaacacaaacttccatgcttttcccggagcaaggaagacagacctctgtgatcagagatgataacctacccaacaggg ccgtaacacacgccgaggcacaagtctccatgattccggaaagagttcctgagaacataggagtccagtctgccagagat ttacagacagaagctctggcagaacagctgagagctgtcgcaggtataaacgacgatgagatggatatgccgtcgtataa gatggataccaaaccgagagatttacagacagaagcactggcggaacagctgagagctgcagccggtataaacgatgatg agatggatatgccatcgtataaaatggataccaaaccgagaggtatagctgtcattataaacaatgagaaattcttcaaa gtcccttctgatagaatgagtaaagaaatgccacccagagtaggaacagaaaaagatgctgacaacttggtgtacatttt ccgcaaactggactttattgtggaacgatataacgatcttcaggattttgaaattgttcggaagttggtggaaatcgcct acaaccgtgaccatacgaactatgattgtttggtagtgtgtattttatcacatggtgttctgggacatgtatacggtaca aatggtaggcttgtcaacataaaggactgtacagggtgtttccgtgcacaggtttgtcccagtctggcgggaaaaccaaa gttattcttcatacaagcttgtcaggggagagaaaaacaaggaggtactgaaattgagaaggacagtgaccttgaatcag acaacgcgcccaaagaaatgatcccagacgaggcagattttgttctaggttacgctacgattttggcttag |
|
Protein
| Protein ID | pfu_aug2.0_2134.1_15422.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2134.1_15422.t1 MMDEIDGPNPDYTECIYGVKPGFQEVRSGVDWTRCLIEVDSGLDEGDVEQLKFLLRGCISDARLKKLSCGTEIFQELHNS GYIDIDNGSLDILEECLVMLFEIGEDIDESEFKSAIFALGSVVPKGQLQKMDSVLDLFIYLEKKDELSHENVEILPKVLH AIDRGDLLEKVRQYKNNYNSTSNVNNAPLRVTLPPSRPQHQQHQQHHPYQHQQPLLRHQQPLPPQQHGYQQQAFVRPMVP TYQQMPNCLQYEEMESEPRTPLTAGTESVSSQEGMEFGSSKNKPPSVQRQLSINVFLHLAPIVAKKPNWEQILIDLGLTK TDLDSIRRKSSPEVFKIVNDALLYWRDKVMKNSEECSKRLIDVLQRSGIQASLTGTGLNLAPTSRPGTAENDEPTPVRPF VPPSENLSSRTQPPPTPPETDRRVTEMETQTSMLFPEQGRQTSVIRDDNLPNRAVTHAEAQVSMIPERVPENIGVQSARD LQTEALAEQLRAVAGINDDEMDMPSYKMDTKPRDLQTEALAEQLRAAAGINDDEMDMPSYKMDTKPRGIAVIINNEKFFK VPSDRMSKEMPPRVGTEKDADNLVYIFRKLDFIVERYNDLQDFEIVRKLVEIAYNRDHTNYDCLVVCILSHGVLGHVYGT NGRLVNIKDCTGCFRAQVCPSLAGKPKLFFIQACQGREKQGGTEIEKDSDLESDNAPKEMIPDEADFVLGYATILA |
|