Gene
| Gene Model ID | pfu_aug2.0_214.1_13799 |
|---|---|
| Locus | scaffold214.1 : 1 ... 20405 : - |
| To GenomeBrowser | scaffold214.1:1..20405 |
| Genes list of scaffold | scaffold214.1 |
| Synonym | pfu_aug1.0_22597.1_69501 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_214.1_13799.t1 | 3 | 1 | VCBS | 44 | 76 | 1.0e-05 | 25.7 | 2.5e-05 | 0.053 | 13.8 |
| pfu_aug2.0_214.1_13799.t1 | 3 | 2 | VCBS | 135 | 197 | 1.0e-05 | 25.7 | 0.00035 | 0.75 | 10.1 |
| pfu_aug2.0_214.1_13799.t1 | 3 | 3 | VCBS | 187 | 200 | 1.0e-05 | 25.7 | 0.043 | 91.0 | 3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_214.1_13799.t1 | gi|260815531|ref|XP_002602526.1| | hypothetical protein BRAFLDRAFT_93831 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_214.1_13799.t1 | gi|156380985|ref|XP_001632047.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_214.1_13799.t1 | gi|752875302|ref|XP_011254998.1| | PREDICTED: uncharacterized protein LOC105250534 isoform X1 [Camponotus floridanus] | 7.00649e-43 |
| pfu_aug2.0_214.1_13799.t1 | gi|755948444|ref|XP_011300782.1| | PREDICTED: uncharacterized protein LOC105265139 [Fopius arisanus] | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug2.0_214.1_13799.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_214.1_13799.t1 atggttgccattttgtacgtttcaaatcagttttcgttaaaatcaaaaagtaaaggaaacttgacatcgaaacatttacc cataaaaagtagcagagatgatgtgtttatacaaggatgtgacgaaatatcggtagaagatgtgtggaccgtggggttac ccaagttaaacacagagtctgctatacgaatgattgatgtaaataaagatggcgtactggatattttactgggatttgga acaggtgcggacggttattacgttccaagaatagtatgtgacatctacttcaacggcacctacccttgttttggtggagt tttagccttagatggtactacaggaaaagagatatggcgccattactcgcctcatgaattatttggaattaattgtaacg ccgatctcgataatgatggagtattggactgtgtatgtggaggtagagctggggcattccaggctatcagcgggagacat ggccaactgttatggagttttgacaaaatgagtattaaaaacgaaatcatgaatctgtatactgcacaaattattcctga tcaaaacggagacggaatggtggatgttttggctatacatggaggagatcctttgagagagccagggagtaaagaaagac ttgcaggacggattattttcttcagtggaaggactggtgacgtgcttagttgggcggaagtgcctgatcacaaggaatca tactattcattacagcaagcacagcacacacagcaaacacagcaaacacagcacacacagcaacacagcaaacacaacac acacagcacatacagcacacacagcacacacagcacacacagcaaatacagcaaatacagcaaacacagcgcacacagca aacacagcacacacagcacaagcagcacacacagcaacacagcacacacagcaaacacagcacacacagcacacacagca cacacagcaaacacagtacacacagcaacacacatcgaaaccccaaaacacccaatgcaaaaacacagagtagaaacgag gaatacaagaacaaatgtacacgaacaaagcagatctgataactgcaaactgagatttaaatctgaaggatacagcaaaa tcatggccatcaatagacatatcgctgctccaggggcaactgtgtattattcaatgagcaggaagagactagagcacagt aattgggtgaataccacagaggaagggttgaggtttatacgtcacaaccccacacgataccgagaatacatggctggtat acaaagtcataatgacgtaggtcatgacgaagcagaaagtcttagtactgattcagagataagtgagtcagaaaaccaaa attctccaatggaatatatgctaaatccattagaagccgatggtcatcgtatgtcttcaaagaaaggaccgccatcgcaa aggttaagatcattccatccttcaatgtttcctgatcagcaactgacagatagaactatggaacggaaaaggatgaaaac tagccgaggtcatattccgtataatcttccacaagaaggtaatgggtatgactataccgatgaccctaatagtgacggag tatacgggaatagtaagcgcctccaaagatatgatttaggtgaaggaagaggactaatggataatatttatatgaagcca acttcagttaggcgaggacgatcaacactcacaaaaactcagaactcaaaaagacatttattgaacgaaaaaacaaattt tcaccggaaacacaaaaagaggaaatggaagcgccatgttggacctcacgatcaggagggaattcaaagacttttatcta ctggttccctagctccaacaacgttaccggtggaccatcctttatttaaccattctatagacctcgtgtttgctacatac tggttcttccctgctaaaacacgagtactgctaccaaaggatcagcaatgtattgatgaaaaactgaaaaacgaggccat tagattcaatattgatagtccatattacggccttgaccatgatggctataaacacagcattacagatgaatgtctggaca agagtgaccatgatctacctgacgaccatacatatcagagccaaacatcatatgacccttttaacattcatatggggcaa atgacggtttacagcattacaaactttccttttctgagtagcaacatcccttcatcgcctgcttatggcgtgttcatatc tcagttgatacgctatgccagagcaattaccaaatataaggattttgatctgaaagctaggcgtctttcagataagcttc tcagtcaggggtatgtttgtgaccaactaacatag |
|
Protein
| Protein ID | pfu_aug2.0_214.1_13799.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_214.1_13799.t1 MVAILYVSNQFSLKSKSKGNLTSKHLPIKSSRDDVFIQGCDEISVEDVWTVGLPKLNTESAIRMIDVNKDGVLDILLGFG TGADGYYVPRIVCDIYFNGTYPCFGGVLALDGTTGKEIWRHYSPHELFGINCNADLDNDGVLDCVCGGRAGAFQAISGRH GQLLWSFDKMSIKNEIMNLYTAQIIPDQNGDGMVDVLAIHGGDPLREPGSKERLAGRIIFFSGRTGDVLSWAEVPDHKES YYSLQQAQHTQQTQQTQHTQQHSKHNTHSTYSTHSTHSTHSKYSKYSKHSAHSKHSTHSTSSTHSNTAHTANTAHTAHTA HTANTVHTATHIETPKHPMQKHRVETRNTRTNVHEQSRSDNCKLRFKSEGYSKIMAINRHIAAPGATVYYSMSRKRLEHS NWVNTTEEGLRFIRHNPTRYREYMAGIQSHNDVGHDEAESLSTDSEISESENQNSPMEYMLNPLEADGHRMSSKKGPPSQ RLRSFHPSMFPDQQLTDRTMERKRMKTSRGHIPYNLPQEGNGYDYTDDPNSDGVYGNSKRLQRYDLGEGRGLMDNIYMKP TSVRRGRSTLTKTQNSKRHLLNEKTNFHRKHKKRKWKRHVGPHDQEGIQRLLSTGSLAPTTLPVDHPLFNHSIDLVFATY WFFPAKTRVLLPKDQQCIDEKLKNEAIRFNIDSPYYGLDHDGYKHSITDECLDKSDHDLPDDHTYQSQTSYDPFNIHMGQ MTVYSITNFPFLSSNIPSSPAYGVFISQLIRYARAITKYKDFDLKARRLSDKLLSQGYVCDQLT |
|