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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_214.1_13803
Locus scaffold214.1 : 118555 ... 136875 : -
To GenomeBrowser scaffold214.1:118555..136875
Genes list of scaffold scaffold214.1
Synonym pfu_aug1.0_541.1_22209

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_214.1_13803.t1 2 1 Carb_anhydrase 65 210 7.6e-35 120.1 1.1e-20 1.6e-16 60.0
pfu_aug2.0_214.1_13803.t1 2 2 Carb_anhydrase 375 450 7.6e-35 120.1 4.5e-20 6.6e-16 58.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_214.1_13803.t1 gi|470596647|ref|XP_004311055.1| PREDICTED: carbonic anhydrase 7 isoform 1 [Tursiops truncatus] 2.0e-12
pfu_aug2.0_214.1_13803.t1 gi|466063887|ref|XP_004280936.1| PREDICTED: carbonic anhydrase 7 isoform X2 [Orcinus orca] 2.0e-12
pfu_aug2.0_214.1_13803.t1 gi|466063892|ref|XP_004280937.1| PREDICTED: carbonic anhydrase 7 isoform X1 [Orcinus orca] 2.0e-12

Transcript
Transcript IDpfu_aug2.0_214.1_13803.t1
Definition-
>pfu_aug2.0_214.1_13803.t1
atgcagaaatgtttcctgcttattgtttttccattttcctatggagcctccttacatgaacataaaactcaaaatgaaaa
gacgccaccagatggcgaatgtgcaataccaaaggatgacagctgtaaaatggatttcagctacaacagggacatatgtc
aaggtccacttcactgggaatccatatcatcatgttataaagcttgtgggaataatataaggcaatcaccaatcaacata
gtgtccaagaaagccgtatttttaccgtatctccctcaattaagattcaaatcaacaaatgatgaaataccaacggacgt
cgccaaccacgaaaaccgtgcgccagagttcaaaccggaggatggaaagaatctacaagtcagactacagaagcttatcg
acgggcactataggttccataacctacatgttcacattggcaaggataataacaagggctccgaacatagcgtggacagt
acgtttactccgatggaggctcatatggtgttttatcacgatccgagcaaaggaataaaaccaccatctgttcagctagg
aggagcgtatgctggtaaaaatcagtttgttgtcattgcagttttcctcgaggataaagacaatgtcccatctgccgaag
ttgacggtgatacagatacaagtatccctattaaagactgtaagggaaagaaatgcgacaacgttgatgacgctagtatc
gtcaataaagaaaatccagatggtaacgtggatgacgcatctgccgtaggtgataacgataaagatgaaagtatccctgt
agaggaatgcaagggaaagaattgcgacaacgttgatgatactaacatcgtcaatgaagaaaatgcagataataacgggg
atgacgcaaaaatcgtcaatgacaaaaacccaggtgataacgttgaaaacgagaacgagaataatgatgataaagctgac
aaggtcccgcgcccaaggcctcgtcgttctacctttttacttagaaatgtcggaatgttccgaagaatattttcgaagcg
agatccttttaaaggaaaatgtaaaacaagtaaagctaaggttctgagcagagtccttgaatgtgcatacagaaataaca
aactgaagaaattcacacatcacggagaagatgtaggacttcatgttcaactaaacccggaaatggttttaccatcgtca
aagtttagacattactacacatatcaaggatccttgacaactcccccttgtactgaatccgttctctgggtggtctcaaa
atgccatgtgaaagtatctgaaagggtcctagaggcattgcggagtattgaaggatatgaagatggtaccaaattaggca
aatatggaactagacgtccaacaaaggagaatggaagtccacctcctgtttacaaaagtttcatatga

Protein
Protein IDpfu_aug2.0_214.1_13803.t1
Definition-
>pfu_aug2.0_214.1_13803.t1
MQKCFLLIVFPFSYGASLHEHKTQNEKTPPDGECAIPKDDSCKMDFSYNRDICQGPLHWESISSCYKACGNNIRQSPINI
VSKKAVFLPYLPQLRFKSTNDEIPTDVANHENRAPEFKPEDGKNLQVRLQKLIDGHYRFHNLHVHIGKDNNKGSEHSVDS
TFTPMEAHMVFYHDPSKGIKPPSVQLGGAYAGKNQFVVIAVFLEDKDNVPSAEVDGDTDTSIPIKDCKGKKCDNVDDASI
VNKENPDGNVDDASAVGDNDKDESIPVEECKGKNCDNVDDTNIVNEENADNNGDDAKIVNDKNPGDNVENENENNDDKAD
KVPRPRPRRSTFLLRNVGMFRRIFSKRDPFKGKCKTSKAKVLSRVLECAYRNNKLKKFTHHGEDVGLHVQLNPEMVLPSS
KFRHYYTYQGSLTTPPCTESVLWVVSKCHVKVSERVLEALRSIEGYEDGTKLGKYGTRRPTKENGSPPPVYKSFI

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