Gene
| Gene Model ID | pfu_aug2.0_214.1_13806 |
|---|---|
| Locus | scaffold214.1 : 230185 ... 241444 : + |
| To GenomeBrowser | scaffold214.1:230185..241444 |
| Genes list of scaffold | scaffold214.1 |
| Synonym | pfu_aug1.0_11454.1_60897 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorting nexin-12-like | GO:0035091 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_214.1_13806.t1 | 1 | 1 | PX | 8 | 97 | 1.9e-22 | 79.2 | 1.4e-26 | 2.1e-22 | 79.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_214.1_13806.t1 | gi|524864118|ref|XP_005088897.1| | PREDICTED: sorting nexin-12-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_214.1_13806.t1 | gi|676475151|ref|XP_009060380.1| | hypothetical protein LOTGIDRAFT_229207 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_214.1_13806.t1 | gi|170030574|ref|XP_001843163.1| | sorting nexin [Culex quinquefasciatus] | 0.0 |
| pfu_aug2.0_214.1_13806.t1 | gi|347969894|ref|XP_311723.4| | AGAP003437-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_214.1_13806.t1 | gi|91076806|ref|XP_974293.1| | PREDICTED: sorting nexin-12 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_214.1_13806.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_214.1_13806.t1 atgggtatacatacaaacttacctgtttttaaagtcaaagaatcgagtgtaaggaggaggtacagtgattttgaatggtt acggagtgaattagagagagacagtaagattgttgttcccccattacccggtaaagcattgaagagacagcttccattcc gtgcggatgatggaatatttgaagatgaatttattgaggaaagaagaaaagggctagagcaatttataaacaaggttgca ggacatccattagcacagaatgagaaatgtttacacatgtttctacaagagcctgttattgataagaactatgtaccagg aaaaatacgtactacatga |
|
Protein
| Protein ID | pfu_aug2.0_214.1_13806.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_214.1_13806.t1 MGIHTNLPVFKVKESSVRRRYSDFEWLRSELERDSKIVVPPLPGKALKRQLPFRADDGIFEDEFIEERRKGLEQFINKVA GHPLAQNEKCLHMFLQEPVIDKNYVPGKIRTT |
|