Gene
| Gene Model ID | pfu_aug2.0_2149.1_32070 |
|---|---|
| Locus | scaffold2149.1 : 175559 ... 179504 : - |
| To GenomeBrowser | scaffold2149.1:175559..179504 |
| Genes list of scaffold | scaffold2149.1 |
| Synonym | pfu_aug1.0_123637.1_57118 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2149.1_32070.t1 | 1 | 1 | Homeobox | 16 | 71 | 1.4e-17 | 63.0 | 1.9e-21 | 2.8e-17 | 62.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2149.1_32070.t1 | gi|585706582|ref|XP_002740551.2| | PREDICTED: paired mesoderm homeobox protein 2-like [Saccoglossus kowalevskii] | 9.0e-15 |
| pfu_aug2.0_2149.1_32070.t1 | gi|752382616|ref|XP_011228373.1| | PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-4 [Ailuropoda melanoleuca] | 2.0e-14 |
| pfu_aug2.0_2149.1_32070.t1 | gi|507931994|ref|XP_004677238.1| | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_2149.1_32070.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2149.1_32070.t1 atggttctatcagaaactaagtgcagaagtaggggaaaggaaacaagataccgtacaaaatattccgatgagcagttgga ggtaatggagaagacatttgctaagaatcagtatcccgattctgaagtcctagctgacctgtctgaccgtctggatatag ctcatgataagttaattgtttggtttcaaaatcgtcgcagcaaattcaagcgccagtcaaaaggatccaagatgtcatgg atgcggaaacagttctacgtcacttccgactctccaaaagaaatatcagatcaaccgtcaccccggattacaccatcttc tatattcccggcaggtcacgtgatatctccccagcagacgattggcagtcagatttcacgcaaactatacttttctccag aaagagagtatgtaccaaactgttcagatttagaaccactagatctgagcagccgagactcgctatcgtcttcgccctcc agtagatcttcctcgccagactatcagcctctgtatcatccatcacagatccaggtcacggcaccaaatcaaacagcgaa cactttacatctgccgttacatccgggtttctttttacctttgacccctatggttgccactcagtgtcagtattttggta cggttgtgctgccatctttggaatgtgactcaccgagaacattcatttccttgtga |
|
Protein
| Protein ID | pfu_aug2.0_2149.1_32070.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2149.1_32070.t1 MVLSETKCRSRGKETRYRTKYSDEQLEVMEKTFAKNQYPDSEVLADLSDRLDIAHDKLIVWFQNRRSKFKRQSKGSKMSW MRKQFYVTSDSPKEISDQPSPRITPSSIFPAGHVISPQQTIGSQISRKLYFSPEREYVPNCSDLEPLDLSSRDSLSSSPS SRSSSPDYQPLYHPSQIQVTAPNQTANTLHLPLHPGFFLPLTPMVATQCQYFGTVVLPSLECDSPRTFISL |
|