Gene
| Gene Model ID | pfu_aug2.0_2150.1_02008 |
|---|---|
| Locus | scaffold2150.1 : 42066 ... 47177 : + |
| To GenomeBrowser | scaffold2150.1:42066..47177 |
| Genes list of scaffold | scaffold2150.1 |
| Synonym | pfu_aug1.0_1173.1_22471 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2150.1_02008.t1 | 2 | 1 | Glyco_transf_49 | 14 | 285 | 0.0 | 324.6 | 0.0 | 0.0 | 210.7 |
| pfu_aug2.0_2150.1_02008.t1 | 2 | 2 | Glyco_transf_49 | 427 | 564 | 0.0 | 324.6 | 5.5e-37 | 8.1e-33 | 113.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2150.1_02008.t1 | gi|348520260|ref|XP_003447646.1| | PREDICTED: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase-like [Oreochromis niloticus] | 2.0e-37 |
| pfu_aug2.0_2150.1_02008.t1 | gi|499040212|ref|XP_004570734.1| | PREDICTED: beta-1,4-glucuronyltransferase 1 [Maylandia zebra] | 5.0e-37 |
| pfu_aug2.0_2150.1_02008.t1 | gi|548532616|ref|XP_005752040.1| | PREDICTED: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase-like [Pundamilia nyererei] | 6.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_2150.1_02008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2150.1_02008.t1 atgtcatatgataacgaacacgccaatgaagtatcaagtcttaccttggtaacgcaaacacatattgataatctgtactt gttagattatctagcacatagatggaacggtccgatatccatagcagtttttatagagagagacgacactgaccttatac agcaagtgaggtatatgcacctctgtaatccacatattaaaacgaacacatcttttcatatcatgtgtccagttaatagt gttctcgtgctaaagaagatagactgttcgagacaatggtcaaaacattcacaagatgaagaaactcggactatagcagg aatgccttatcctcacaaccatatgaggaaccttgcactcccagaagatcaaggaggctttattttttacgtcgacattg acatggtaccttcatggaatatacatgacaactttctagacattgcaacacacctcagtgacacaatgctgcgctcttct gttttcattataccgtccttcgaatccaaagactttaatgaagttccaggtgacagaaaagctcttcaagatggtcttaa agatggccgtgttcagacattccataaccgttcttgtccgaagtgtcaaaatgatacacgctatgatcaatggtttgatt caacagatcatgaatttatgtacccagttaaaagaaaatattgtgcttatgaaccattttatatcatacttaaggaacga cacttgctgtacgaagaaagatttataggaagagggtatgacagaataagtcaggttaccgaagtatggttatctggact tgacttttatgtcctacgcaattcattcattgtacatcgtggattccatgacgacccaccgccattaccattgcaaagtc ctccgcatgcgcacacaacattacatcccagtgtctacagagaaagacacatagagttccttcgggctaaataccttcgc gatgccaaatacagggataaaattcgagcaaaattcggcaaggagcgtttggagcagattgaaaacaagctatcaattaa gaactttacaagtagagagtctattttgcgcgaggttaagaggattgaatggctcggtgagttgggcgtcgatgaaggcg ctgaataccaatgtgtggaaatgtcagttcaacaagacgaaatatttcccggaacaataacaacggatgtttcaaacatt aagttgaagattagagaagatgaaattcttttcaaacgccagaaggncttaaagtacgcaagaacattagagaaacgaac ccttgatacttcaatatttatcgtaccctccttcgagtccaacaatccttctgacataccaggaataaaggttaagctaa ttcaaaggataatcacgaaagaaataagaatttttcatctgaaaacttgtggtgcatgccagtacaacactaattaccta aagtggaaatatttgaagaatacgactatgtcaacatatgaaatcgagtccaagttcttcaattatgagccgttttacat catccggtctgacaagctgatcccttataacgaagcatttgttggtagaggatacgataggataagtcaggtttgtgaaa tgtggatggcaggattcaaattccgcgtactatctgatgccttcttggtacacaggggcttccataacactaccaaactt agaaaaaggcagtgcccattaagaaagaaaaagaagtatgtgaacagctgtgtaagaaaaccagacatcttagacttcta caagatagtagcagaaattgaccaaaaacgtcatattaataaaagaaacaaagagagtcttcggatgatggacgaagaag aaagagcggaaatgttaattgatgatccaaatagagaactattttggggatttgtagaagagttggaaaagaaatataat ggcacaggcagaatgataagtcaagaatggtacttctaa |
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Protein
| Protein ID | pfu_aug2.0_2150.1_02008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2150.1_02008.t1 MSYDNEHANEVSSLTLVTQTHIDNLYLLDYLAHRWNGPISIAVFIERDDTDLIQQVRYMHLCNPHIKTNTSFHIMCPVNS VLVLKKIDCSRQWSKHSQDEETRTIAGMPYPHNHMRNLALPEDQGGFIFYVDIDMVPSWNIHDNFLDIATHLSDTMLRSS VFIIPSFESKDFNEVPGDRKALQDGLKDGRVQTFHNRSCPKCQNDTRYDQWFDSTDHEFMYPVKRKYCAYEPFYIILKER HLLYEERFIGRGYDRISQVTEVWLSGLDFYVLRNSFIVHRGFHDDPPPLPLQSPPHAHTTLHPSVYRERHIEFLRAKYLR DAKYRDKIRAKFGKERLEQIENKLSIKNFTSRESILREVKRIEWLGELGVDEGAEYQCVEMSVQQDEIFPGTITTDVSNI KLKIREDEILFKRQKXLKYARTLEKRTLDTSIFIVPSFESNNPSDIPGIKVKLIQRIITKEIRIFHLKTCGACQYNTNYL KWKYLKNTTMSTYEIESKFFNYEPFYIIRSDKLIPYNEAFVGRGYDRISQVCEMWMAGFKFRVLSDAFLVHRGFHNTTKL RKRQCPLRKKKKYVNSCVRKPDILDFYKIVAEIDQKRHINKRNKESLRMMDEEERAEMLIDDPNRELFWGFVEELEKKYN GTGRMISQEWYF |
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