Gene
| Gene Model ID | pfu_aug2.0_2151.1_05426 |
|---|---|
| Locus | scaffold2151.1 : 10746 ... 25230 : + |
| To GenomeBrowser | scaffold2151.1:10746..25230 |
| Genes list of scaffold | scaffold2151.1 |
| Synonym | pfu_aug1.0_1868.1_37157 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neurogenic locus notch homolog protein 1 | GO:0000122 GO:0001655 GO:0001837 GO:0002009 GO:0003179 GO:0003208 GO:0005488 GO:0005634 GO:0007219 GO:0007389 GO:0007517 GO:0008219 GO:0008544 GO:0009966 GO:0016020 GO:0022603 GO:0030182 GO:0030334 GO:0030855 GO:0035239 GO:0042063 GO:0042127 GO:0042692 GO:0044431 GO:0045165 GO:0045893 GO:0048514 GO:0048598 GO:0048646 GO:0048732 GO:0048738 GO:0050768 GO:0051094 GO:0051240 GO:0060976 GO:0070013 GO:0070887 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2151.1_05426.t1 | 7 | 1 | DSL | 33 | 65 | 3.7e-12 | 46.0 | 0.36 | 530.0 | 0.7 |
| pfu_aug2.0_2151.1_05426.t1 | 7 | 2 | DSL | 87 | 132 | 3.7e-12 | 46.0 | 2.5e-15 | 3.7e-12 | 46.0 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 1 | hEGF | 100 | 105 | 1.5e-10 | 40.4 | 3.9 | 5800.0 | -2.2 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 1 | EGF | 105 | 121 | 4.2e-13 | 48.9 | 7.3 | 11000.0 | -3.5 |
| pfu_aug2.0_2151.1_05426.t1 | 7 | 3 | DSL | 143 | 154 | 3.7e-12 | 46.0 | 0.065 | 97.0 | 3.0 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 2 | EGF | 145 | 153 | 4.2e-13 | 48.9 | 0.073 | 110.0 | 2.9 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 2 | hEGF | 145 | 154 | 1.5e-10 | 40.4 | 0.00034 | 0.5 | 10.5 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 3 | EGF | 161 | 189 | 4.2e-13 | 48.9 | 2.1e-07 | 0.0003 | 20.6 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 3 | hEGF | 179 | 191 | 1.5e-10 | 40.4 | 0.0003 | 0.44 | 10.7 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 4 | EGF | 203 | 227 | 4.2e-13 | 48.9 | 1.7e-06 | 0.0025 | 17.7 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 4 | hEGF | 216 | 228 | 1.5e-10 | 40.4 | 1.1e-05 | 0.016 | 15.2 |
| pfu_aug2.0_2151.1_05426.t1 | 7 | 4 | DSL | 218 | 228 | 3.7e-12 | 46.0 | 10.0 | 15000.0 | -4.4 |
| pfu_aug2.0_2151.1_05426.t1 | 7 | 5 | DSL | 218 | 265 | 3.7e-12 | 46.0 | 10.0 | 15000.0 | -6.3 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 5 | EGF | 235 | 263 | 4.2e-13 | 48.9 | 2.6e-07 | 0.00039 | 20.3 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 5 | hEGF | 253 | 265 | 1.5e-10 | 40.4 | 1.1e-05 | 0.016 | 15.2 |
| pfu_aug2.0_2151.1_05426.t1 | 7 | 6 | DSL | 255 | 265 | 3.7e-12 | 46.0 | 2.2 | 3300.0 | -1.9 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 6 | EGF | 272 | 308 | 4.2e-13 | 48.9 | 8.1e-06 | 0.012 | 15.5 |
| pfu_aug2.0_2151.1_05426.t1 | 7 | 7 | DSL | 296 | 310 | 3.7e-12 | 46.0 | 3.0 | 4500.0 | -2.3 |
| pfu_aug2.0_2151.1_05426.t1 | 6 | 6 | hEGF | 299 | 310 | 1.5e-10 | 40.4 | 0.00075 | 1.1 | 9.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2151.1_05426.t1 | gi|198425403|ref|XP_002130810.1| | PREDICTED: fibropellin-1-like [Ciona intestinalis] | 3.0e-39 |
| pfu_aug2.0_2151.1_05426.t1 | gi|585715982|ref|XP_006825440.1| | PREDICTED: fibropellin-1-like [Saccoglossus kowalevskii] | 6.0e-38 |
| pfu_aug2.0_2151.1_05426.t1 | gi|148227866|ref|NP_001081074.1| | neurogenic locus notch homolog protein 1 precursor [Xenopus laevis] | 8.0e-37 |
| pfu_aug2.0_2151.1_05426.t1 | gi|625291068|ref|XP_007637278.1| | PREDICTED: LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1 isoform X2 [Cricetulus griseus] | 1.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_2151.1_05426.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2151.1_05426.t1 atgtatacgggactggtagattatcaaaataggaaaagtatcgacttctctagtcccagatattcatctaatgatacatc gcttgtgtttgaagagaattcaggacaaactgattctgtctatgtatatgtctacattactcgaaaacagtggtataaag aaaagctacaggattttttggatgaaaattgtgatgtctacaacaattcaacaaggatttggggaactcatagtctcagc tacccgtatttaggttgcaacctttcattctacatgaactacacatgttcagaatattactatggggaggactgtgatgt atattgtaagccacataacgatagtaatggccactatagctgtggtgtgtatggagctaaaatatgcatgcaaggtgaaa acaatttctggtatgagagtgtacaatatttgtgttcgaaaggatacacaggaaaaaattgcttagtaaatatagacgaa tgtacatcgaatccttgtgtccatggcatgtgcaaagacatgatagactattttatgtgtgaatgtgagttaggtttctc tggaattttatgcgatgaagatatcaatgactgtattaacacaacttgccatcatggagagtgtattgatggactgaaca tctacacttgtaattgtgaaaatggttttactggagcacactgcaacgcctctgttgacgattgtaaaacgaatatgtgt gtgaatggaatgtgtgtagatggtcacagaaattacacttgcctatgtaaccctggttatacaggaagtgtttgtgatac aaggatagatttttgtttcaataattcatgtttaaatggcaaatgcatcgatgcattttacgaaactattaagacaagag aatcaagctatttatgtgtctgtgatcttgattttactggtcaattctgtgatattgaaatcaacaatttgacagaaact gtgaatatcaaatccacagtaacaaaatcatatttatctgaagtaaaaagtccagagacacagaaaggttccacatttac agagtttccattaacgacgcaagtttcagaaacagtcagcagtacattagaaacgagtggatcaggcagagtaacatcaa catatataacgagagagaaaaattcatcagatttcgagcagtcaaaggatttagaaaataagaaatcggtgaaatacatg taccctctgattgcggtggctgttgttttggtattggttcttggaattgttgcagtggttgtatgttataaacggcggaa aggaagacaacccagcatggaatcgaacactattgcagagggtaatgatttgaacgatgcattagaccgtaggacatccc ttgatgactttaatagagctatagcggaacgacattatggttacatgtcgggcgacagcggtgccaacttctccagagtt tacaatagctttattactcaggacattgataatggtatacacagggcatctttcgtatga |
|
Protein
| Protein ID | pfu_aug2.0_2151.1_05426.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2151.1_05426.t1 MYTGLVDYQNRKSIDFSSPRYSSNDTSLVFEENSGQTDSVYVYVYITRKQWYKEKLQDFLDENCDVYNNSTRIWGTHSLS YPYLGCNLSFYMNYTCSEYYYGEDCDVYCKPHNDSNGHYSCGVYGAKICMQGENNFWYESVQYLCSKGYTGKNCLVNIDE CTSNPCVHGMCKDMIDYFMCECELGFSGILCDEDINDCINTTCHHGECIDGLNIYTCNCENGFTGAHCNASVDDCKTNMC VNGMCVDGHRNYTCLCNPGYTGSVCDTRIDFCFNNSCLNGKCIDAFYETIKTRESSYLCVCDLDFTGQFCDIEINNLTET VNIKSTVTKSYLSEVKSPETQKGSTFTEFPLTTQVSETVSSTLETSGSGRVTSTYITREKNSSDFEQSKDLENKKSVKYM YPLIAVAVVLVLVLGIVAVVVCYKRRKGRQPSMESNTIAEGNDLNDALDRRTSLDDFNRAIAERHYGYMSGDSGANFSRV YNSFITQDIDNGIHRASFV |
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