Gene
| Gene Model ID | pfu_aug2.0_216.1_20434 |
|---|---|
| Locus | scaffold216.1 : 51156 ... 55920 : + |
| To GenomeBrowser | scaffold216.1:51156..55920 |
| Genes list of scaffold | scaffold216.1 |
| Synonym | pfu_aug1.0_244388.1_72172 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_216.1_20434.t1 | 1 | 1 | BTB | 1 | 68 | 1.8e-11 | 43.9 | 2.8e-14 | 4.1e-11 | 42.8 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 1 | Kelch_1 | 49 | 61 | 3.2e-24 | 84.2 | 3.3 | 4900.0 | -2.9 |
| pfu_aug2.0_216.1_20434.t1 | 1 | 1 | BACK | 75 | 177 | 1.3e-24 | 85.9 | 2.0e-27 | 3.0e-24 | 84.8 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 1 | Kelch_5 | 230 | 245 | 8.7e-14 | 51.1 | 1.1 | 1600.0 | -0.9 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 1 | Kelch_2 | 230 | 240 | 5.4e-09 | 35.4 | 6.6 | 9800.0 | -3.4 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 1 | Kelch_6 | 231 | 259 | 1.4e-20 | 72.5 | 0.11 | 160.0 | 2.6 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 1 | Kelch_3 | 234 | 245 | 8.2e-13 | 48.1 | 5.0 | 7400.0 | -2.7 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 2 | Kelch_5 | 255 | 316 | 8.7e-14 | 51.1 | 0.015 | 22.0 | 5.1 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 2 | Kelch_6 | 278 | 332 | 1.4e-20 | 72.5 | 6.4e-07 | 0.00095 | 19.2 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 2 | Kelch_1 | 280 | 328 | 3.2e-24 | 84.2 | 9.5e-08 | 0.00014 | 21.3 |
| pfu_aug2.0_216.1_20434.t1 | 4 | 1 | Kelch_4 | 280 | 328 | 9.0e-12 | 44.5 | 0.00037 | 0.55 | 10.0 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 2 | Kelch_2 | 281 | 328 | 5.4e-09 | 35.4 | 0.00049 | 0.72 | 9.7 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 2 | Kelch_3 | 288 | 339 | 8.2e-13 | 48.1 | 1.6e-05 | 0.024 | 14.7 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 3 | Kelch_1 | 332 | 379 | 3.2e-24 | 84.2 | 1.0e-12 | 1.6e-09 | 37.1 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 3 | Kelch_6 | 332 | 379 | 1.4e-20 | 72.5 | 2.1e-09 | 3.1e-06 | 27.1 |
| pfu_aug2.0_216.1_20434.t1 | 4 | 2 | Kelch_4 | 332 | 379 | 9.0e-12 | 44.5 | 0.00015 | 0.23 | 11.2 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 3 | Kelch_2 | 332 | 375 | 5.4e-09 | 35.4 | 0.0022 | 3.3 | 7.6 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 3 | Kelch_5 | 336 | 366 | 8.7e-14 | 51.1 | 8.1e-06 | 0.012 | 15.5 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 3 | Kelch_3 | 341 | 389 | 8.2e-13 | 48.1 | 1.7e-07 | 0.00025 | 21.1 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 4 | Kelch_5 | 378 | 404 | 8.7e-14 | 51.1 | 2.0e-05 | 0.029 | 14.3 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 4 | Kelch_1 | 383 | 415 | 3.2e-24 | 84.2 | 0.00027 | 0.39 | 10.2 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 4 | Kelch_6 | 383 | 430 | 1.4e-20 | 72.5 | 6.1e-05 | 0.09 | 12.9 |
| pfu_aug2.0_216.1_20434.t1 | 4 | 3 | Kelch_4 | 383 | 423 | 9.0e-12 | 44.5 | 6.8e-05 | 0.1 | 12.4 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 4 | Kelch_2 | 385 | 399 | 5.4e-09 | 35.4 | 0.15 | 230.0 | 1.8 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 4 | Kelch_3 | 392 | 417 | 8.2e-13 | 48.1 | 0.014 | 20.0 | 5.4 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 5 | Kelch_1 | 430 | 451 | 3.2e-24 | 84.2 | 0.0002 | 0.29 | 10.6 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 5 | Kelch_5 | 430 | 450 | 8.7e-14 | 51.1 | 0.0012 | 1.7 | 8.6 |
| pfu_aug2.0_216.1_20434.t1 | 4 | 4 | Kelch_4 | 430 | 451 | 9.0e-12 | 44.5 | 0.012 | 18.0 | 5.1 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 5 | Kelch_2 | 430 | 449 | 5.4e-09 | 35.4 | 0.00022 | 0.33 | 10.7 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 5 | Kelch_6 | 434 | 451 | 1.4e-20 | 72.5 | 0.0095 | 14.0 | 6.0 |
| pfu_aug2.0_216.1_20434.t1 | 5 | 5 | Kelch_3 | 440 | 450 | 8.2e-13 | 48.1 | 0.78 | 1100.0 | -0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_216.1_20434.t1 | gi|524864199|ref|XP_005088937.1| | PREDICTED: kelch-like protein 12-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_216.1_20434.t1 | gi|676449964|ref|XP_009052224.1| | hypothetical protein LOTGIDRAFT_63855, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_216.1_20434.t1 | gi|260821483|ref|XP_002606062.1| | hypothetical protein BRAFLDRAFT_92081 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_216.1_20434.t1 | gi|657537532|ref|XP_008275202.1| | PREDICTED: kelch-like protein 38 [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_216.1_20434.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_216.1_20434.t1 atgttcaccagtgacgtcattgaaagagaaggaagtaaagtacctgttcacagcgtagaggcagcaacattagaaagtat tctagattacatgtactccggagagctcgacatctccaaccaaaacgtacagaatctattctctgcctccaatttcttcg aaatgttagatctggttgagaaatgcacagatcatatgataaatgccatcaataccacgaactgcctggaagtttacttt ttcggcgagttcagttcgtgtaatagattacaagaggccgcattctcattcatcctcaagaaatttgtggaaatatcgag aacggatgagtttaaggcgaaagtgtccgtagaactgttggagaaattcttggaatcggacggaatttacgtggagaaag aggaggagatatttgaatatattatcaaatgggtagagcatgatattgatgagagaaaatccgctttctgtcgtttgttc aagcatttgagaattactttaatcgacgacagttatttggaagaaacaataaaacctaatcatttggtgaagagtaatcc attttgcacaagtttgttggcctccgctaaaatttacaagatccaaagcagtattggtggagtacaaaacaccgaagatg atttcacggaatcattttgtttggtaaatccgaaaccgcgaatgggcatgtacaaccggaagttgatagtgttttccggc ggaactgtatcagcagacgacaggtctttgaccgcgtttgatccagctacaaggaaaaactactgtgccgttaaacctca tccaacatacgaatataagtacaagttggaacactacagcttggtatgcgtcaatgacagtgtcttgtatttccttggag gcatatttttcgacaactaccatttccagtcaacaggggaggcattgcaagatgtctacagatatgatcaacgagatctg aaatgggcaaaaatcaaaccaatgatttgtaaaagatgtgctctctccgcatgcgcgttcggtgaagaaatttacgtcgt tggcggcaagtcctctttccctaggggtgaggctttagatagtatggaggtttatgactcggagtacgactattggtcaa tgctggagcccatgccgttaagcttgtacttccacgccacgtgcatcttccaggatgccatgtacgtttttggcgggaaa gacgcattggacgaatgtgtggacgtcgtatgccgttatagcattaccgataaattctggtccgtagtaagaacgcagat gatgaaaccgcgagcagaacatttggcactgacaacaaataacaaaatattcataataggaggtgcttcgaaggcgggaa atgttgttgaggcatgcactgtggcaatgctcaatactacattcctagaggaaagtgattacgtaagtgttggtgatgta ctggaagaacagcagaataaaactaaatatcatttactgtccaccagttgtccacatatgtcaatacaaacagattttat gataggtccggcaattcctagtattccccatcatcaactatcaccgagtcactataattttaatccttaa |
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Protein
| Protein ID | pfu_aug2.0_216.1_20434.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_216.1_20434.t1 MFTSDVIEREGSKVPVHSVEAATLESILDYMYSGELDISNQNVQNLFSASNFFEMLDLVEKCTDHMINAINTTNCLEVYF FGEFSSCNRLQEAAFSFILKKFVEISRTDEFKAKVSVELLEKFLESDGIYVEKEEEIFEYIIKWVEHDIDERKSAFCRLF KHLRITLIDDSYLEETIKPNHLVKSNPFCTSLLASAKIYKIQSSIGGVQNTEDDFTESFCLVNPKPRMGMYNRKLIVFSG GTVSADDRSLTAFDPATRKNYCAVKPHPTYEYKYKLEHYSLVCVNDSVLYFLGGIFFDNYHFQSTGEALQDVYRYDQRDL KWAKIKPMICKRCALSACAFGEEIYVVGGKSSFPRGEALDSMEVYDSEYDYWSMLEPMPLSLYFHATCIFQDAMYVFGGK DALDECVDVVCRYSITDKFWSVVRTQMMKPRAEHLALTTNNKIFIIGGASKAGNVVEACTVAMLNTTFLEESDYVSVGDV LEEQQNKTKYHLLSTSCPHMSIQTDFMIGPAIPSIPHHQLSPSHYNFNP |
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