Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_216.1_20435
Locus scaffold216.1 : 57558 ... 63765 : -
To GenomeBrowser scaffold216.1:57558..63765
Genes list of scaffold scaffold216.1
Synonym pfu_aug1.0_1528.1_51326

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_216.1_20435.t2 1 1 Metallophos 48 247 1.7e-09 37.3 4.5e-13 3.3e-09 36.4
pfu_aug2.0_216.1_20435.t2 1 1 Metallophos_2 48 262 6.4e-08 32.5 1.3e-11 9.4e-08 32.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_216.1_20435.t2 gi|157104796|ref|XP_001648573.1| AAEL004185-PA [Aedes aegypti] 0.0

Transcript
Transcript IDpfu_aug2.0_216.1_20435.t1
Definition-
>pfu_aug2.0_216.1_20435.t1
atggcagagagttctaatacagtggaggttgataaatacacagataaaccagggaaagcatgggaaaggttaaaggtcaa
acaacagccaatcaaattacccaatcatccccctcaagatcctgtgtcggaagaccatgtacgatttgtgtgtatgtcag
acacacacgggcgagtggagaggtcgtcgctgttagtgcccgcgggtgatgtactgattcatgccggtgattttactgtg
aagggacaaatcagagagatcatgacatttaatgcgtatctaggttccctgcctcacacctgtaaaattgtgatagctgg
aaatcatgacgtcacatttgacgatgaagttctatcaggttccaaagctgtcgcattcggtgtccgacaaagggaattcc
agaagtgccttgatgagttggatgtcaaaaaggtccaacaattgctgacaaaatgtatttatctgcaagattcatctatt
caactctgtggaataaatatccatggatctccatggagcgtaaagcatttttccgcgatggccttccagcggagacgagg
tgtagagatgggtagactgtggcaaaatatcccagataatctagacatacttgtaactcacactccctgctttggatatg
gtgatacaactaccggcaataataacgtgggctgtgtagagctgttaaacacggtacaaaaacgagttcaacctaagttc
cacgtatttggtcacatccatgaagggtatggtaaatggtttgatggcacaactacgtatataaatgcttcaacatgtaa
caagaaatacagacctgtgaatcaaccaatcgtatttgactatcctatcccagaaggccacagcaaagatgaactcctta
aatatttacgaaagcataatgcacaaagttga
Transcript IDpfu_aug2.0_216.1_20435.t2
Definition-
>pfu_aug2.0_216.1_20435.t2
atggcagagagttctaatacagtggaggttgataaatacacagataaaccagggaaagcatgggaaaggttaaaggtcaa
acaacagccaatcaaattacccaatcatccccctcaagatcctgtgtcggaagaccatgtacgatttgtgtgtatgtcag
acacacacgggcgagtggagaggtcgtcgctgttagtgcccgcgggtgatgtactgattcatgccggtgattttactgtg
aagggacaaatcagagagatcatgacatttaatgcgtatctaggttccctgcctcacacctgtaaaattgtgatagctgg
aaatcatgacgtcacatttgacgatgaagttctatcaggttccaaagctgtcgcattcggtgtccgacaaagggaattcc
agaagtgccttgatgagttggatgtcaaaaaggtccaacaattgctgacaaaatgtatttatctgcaagattcatctatt
caactctgtggaataaatatccatggatctccatggcagccagtattctgtgactgggctttcaatttacagaggggtga
cgatttactgcaaaaatggaatcttattcctaaaaacaccgatatactaatcactcatggacccccagtaggatatggtg
atacaactaccggcaataataacgtgggctgtgtagagctgttaaacacggtacaaaaacgagttcaacctaagttccac
gtatttggtcacatccatgaagggtatggtaaatggtttgatggcacaactacgtatataaatgcttcaacatgtaacaa
gaaatacagacctgtgaatcaaccaatcgtatttgactatcctatcccagaaggccacagcaaagatgaactccttaaat
atttacgaaagcataatgcacaaagttga

Protein
Protein IDpfu_aug2.0_216.1_20435.t1
Definition-
>pfu_aug2.0_216.1_20435.t1
MAESSNTVEVDKYTDKPGKAWERLKVKQQPIKLPNHPPQDPVSEDHVRFVCMSDTHGRVERSSLLVPAGDVLIHAGDFTV
KGQIREIMTFNAYLGSLPHTCKIVIAGNHDVTFDDEVLSGSKAVAFGVRQREFQKCLDELDVKKVQQLLTKCIYLQDSSI
QLCGINIHGSPWSVKHFSAMAFQRRRGVEMGRLWQNIPDNLDILVTHTPCFGYGDTTTGNNNVGCVELLNTVQKRVQPKF
HVFGHIHEGYGKWFDGTTTYINASTCNKKYRPVNQPIVFDYPIPEGHSKDELLKYLRKHNAQS
Protein IDpfu_aug2.0_216.1_20435.t2
Definition-
>pfu_aug2.0_216.1_20435.t2
MAESSNTVEVDKYTDKPGKAWERLKVKQQPIKLPNHPPQDPVSEDHVRFVCMSDTHGRVERSSLLVPAGDVLIHAGDFTV
KGQIREIMTFNAYLGSLPHTCKIVIAGNHDVTFDDEVLSGSKAVAFGVRQREFQKCLDELDVKKVQQLLTKCIYLQDSSI
QLCGINIHGSPWQPVFCDWAFNLQRGDDLLQKWNLIPKNTDILITHGPPVGYGDTTTGNNNVGCVELLNTVQKRVQPKFH
VFGHIHEGYGKWFDGTTTYINASTCNKKYRPVNQPIVFDYPIPEGHSKDELLKYLRKHNAQS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495