Gene
| Gene Model ID | pfu_aug2.0_216.1_20437 |
|---|---|
| Locus | scaffold216.1 : 79836 ... 109812 : + |
| To GenomeBrowser | scaffold216.1:79836..109812 |
| Genes list of scaffold | scaffold216.1 |
| Synonym | pfu_aug1.0_4362.1_30668 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dual specificity protein phosphatase 8 isoform x1 | GO:0006796 GO:0016791 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_216.1_20437.t2 | 2 | 1 | Rhodanese | 25 | 57 | 1.3e-07 | 31.9 | 4.9e-08 | 0.00024 | 21.4 |
| pfu_aug2.0_216.1_20437.t2 | 2 | 2 | Rhodanese | 139 | 189 | 1.3e-07 | 31.9 | 0.00052 | 2.6 | 8.4 |
| pfu_aug2.0_216.1_20437.t2 | 1 | 1 | DSPc | 230 | 295 | 7.0e-09 | 35.3 | 2.6e-12 | 1.3e-08 | 34.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_216.1_20437.t2 | gi|558217146|ref|XP_006134994.1| | PREDICTED: dual specificity protein phosphatase 8 isoform X1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_216.1_20437.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_216.1_20437.t1 atggaagctcctagtcatccaagatgtgaatggaaactccttccaccagacatacttgttaccttgctgagaacaagttt agataagatcctacttatagacagtcgctctttcttggagtacaacacctcccgtatccagcagtctgtaaatctctgct gctccaaacttgtcaagaagaagttacagcaagacaaggtccatattagtgaactattaacacagacttgccatattgac attgaggaatacagtgatgtgatagtgtacgaccagtgtacagataatccacaatacctctcccaagacaacttcctact gattttgctcaagaaacttgcatcttgctcaacattcaaaagcgtcactcttttaaaaggtggatatttggcattcaatg ccatgcatcccatattgtgtgaaaacaaagctaacaacaactacaaatgtacccctctgacgtcattgtcccagccatgc ctacccgtggccaatataggccccacccgtatcctgcctttcctctacctgggctctcacagcgatgctatgtcacagga aactatccaggtgaacgagatctcgtacatcctcaacgtgagtacgacatgtcccaaaccccccttcatccaggagggtc acttctgccgcattccagtcaatgacaactatagtgccaaactcttacctttctttgaacaagcattccaatttgtagat atgtga |
|
| Transcript ID | pfu_aug2.0_216.1_20437.t2 |
| Definition | - |
>pfu_aug2.0_216.1_20437.t2 atggaagctcctagtcatccaagatgtgaatggaaactccttccaccagacatacttgttaccttgctgagaacaagttt agataagatcctacttatagacagtcgctctttcttggagtacaacacctcccgtatccagcagtctgtaaatctctgct gctccaaacttgtcaagaagaagttacagcaagacaagggtttggcctatttaacgccagccggcagctatgctttacct gatccacctgatcaaggtgtaattgcggcattttatgtgcggtgttctgttccatataaatgttcgtatgacctttgttt tcaatttcaaaattatgctctggattttttcctggaatgtgaggtccatattagtgaactattaacacagacttgccata ttgacattgaggaatacagtgatgtgatagtgtacgaccagtgtacagataatccacaatacctctcccaagacaacttc ctactgattttgctcaagaaacttgcatcttgctcaacattcaaaagcgtcactcttttaaaaggtggatatttggcatt caatgccatgcatcccatattgtgtgaaaacaaagctaacaacaactacaaatgtacccctctgacgtcattgtcccagc catgcctacccgtggccaatataggccccacccgtatcctgcctttcctctacctgggctctcacagcgatgctatgtca caggaaactatccaggtgaacgagatctcgtacatcctcaacgtgagtacgacatgtcccaaaccccccttcatccagga gggtcacttctgccgcattccagtcaatgacaactatagtgccaaactcttacctttctttgaacaagcattccaatttg tagatatgtga |
|
Protein
| Protein ID | pfu_aug2.0_216.1_20437.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_216.1_20437.t1 MEAPSHPRCEWKLLPPDILVTLLRTSLDKILLIDSRSFLEYNTSRIQQSVNLCCSKLVKKKLQQDKVHISELLTQTCHID IEEYSDVIVYDQCTDNPQYLSQDNFLLILLKKLASCSTFKSVTLLKGGYLAFNAMHPILCENKANNNYKCTPLTSLSQPC LPVANIGPTRILPFLYLGSHSDAMSQETIQVNEISYILNVSTTCPKPPFIQEGHFCRIPVNDNYSAKLLPFFEQAFQFVD M |
|
| Protein ID | pfu_aug2.0_216.1_20437.t2 |
| Definition | - |
>pfu_aug2.0_216.1_20437.t2 MEAPSHPRCEWKLLPPDILVTLLRTSLDKILLIDSRSFLEYNTSRIQQSVNLCCSKLVKKKLQQDKGLAYLTPAGSYALP DPPDQGVIAAFYVRCSVPYKCSYDLCFQFQNYALDFFLECEVHISELLTQTCHIDIEEYSDVIVYDQCTDNPQYLSQDNF LLILLKKLASCSTFKSVTLLKGGYLAFNAMHPILCENKANNNYKCTPLTSLSQPCLPVANIGPTRILPFLYLGSHSDAMS QETIQVNEISYILNVSTTCPKPPFIQEGHFCRIPVNDNYSAKLLPFFEQAFQFVDM |
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