Gene
| Gene Model ID | pfu_aug2.0_216.1_20442 |
|---|---|
| Locus | scaffold216.1 : 222591 ... 253127 : - |
| To GenomeBrowser | scaffold216.1:222591..253127 |
| Genes list of scaffold | scaffold216.1 |
| Synonym | pfu_aug1.0_4831.1_59619 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| morc family cw-type zinc finger protein 3 isoform x2 | GO:0005634 GO:0009987 GO:0043170 GO:0044699 GO:0065007 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_216.1_20442.t1 | 5 | 1 | HATPase_c_3 | 29 | 132 | 4.9e-16 | 58.6 | 9.9e-20 | 4.9e-16 | 58.6 |
| pfu_aug2.0_216.1_20442.t1 | 5 | 2 | HATPase_c_3 | 193 | 213 | 4.9e-16 | 58.6 | 1.5 | 7200.0 | -3.5 |
| pfu_aug2.0_216.1_20442.t1 | 1 | 1 | zf-CW | 402 | 447 | 7.0e-17 | 60.8 | 3.5e-20 | 1.7e-16 | 59.6 |
| pfu_aug2.0_216.1_20442.t1 | 5 | 3 | HATPase_c_3 | 496 | 547 | 4.9e-16 | 58.6 | 0.24 | 1200.0 | -0.9 |
| pfu_aug2.0_216.1_20442.t1 | 5 | 4 | HATPase_c_3 | 583 | 599 | 4.9e-16 | 58.6 | 1.5 | 7400.0 | -3.5 |
| pfu_aug2.0_216.1_20442.t1 | 5 | 5 | HATPase_c_3 | 674 | 685 | 4.9e-16 | 58.6 | 1.1 | 5600.0 | -3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_216.1_20442.t1 | gi|524903090|ref|XP_005107760.1| | PREDICTED: MORC family CW-type zinc finger protein 4-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_216.1_20442.t1 | gi|512845478|ref|XP_004885743.1| | 0.0 | |
| pfu_aug2.0_216.1_20442.t1 | gi|512845474|ref|XP_004885742.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_216.1_20442.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_216.1_20442.t1 atggcgttccataggggcatacagacaagtaaagtcagcccgtcgtatttgcatagcaattccacaagccacacttgggc ttttagcgccatcgcagaattgattgacaatgcatatgatcctgatgttaatgcatctgagctgtggatcgacaagagag atatcaataacataaggtgtctgacattccttgataatggcaatgggatgaatccggataaactccataaaatgttgagc tttggatactgtgaaaaagtatcagttggtaaccacgttcccataggacattatggaaatggatttaagtcaggctccat gaggctcgggaaagatgctatagttttcacacgccaggcacacacaatgagtgtaggactgctatctcagacgtacctca ccaacataaaggcagaaacagtacttgttcccattgtaacatggtcgctgcccaacaagcatagatcaaacaacatagac acaactaataacctgaaggccattacatcacattccatattccgtgatgagaaggaccttctatatgaactagaggctat ggagaagctaggaaccggcacaaaaattattgtttatagtatgaccagaactcaggatggtaattatgagttggatttct ctagtgatcttcaggacatccgtaaccctgatacacatatcatggattactccacaatacatagagctataggacagaag tcacccaaatttatgacctctctaagagaatattgcagtatcttgtacctaaaaccaagaatgaaaataattatacgagg aaagaaagtgaaaacccggttaatatcaaaaagtttgtcacagacggagaccgatgtctataaacctacttggtctcaaa aaccaattcccattaagtttggcttctctagaagtaagaatcccgaggactatgggattatgttttaccacagaaatcgg ttgatccgtgcatatgaaaaagtgggataccaaaatcagccaaatgaccttggagtaggtgtagttggtgtcgtgcaggc tgactttttaacccccacccacaacaaacaggatttcagtcgtgatgagaaatacaatgcatttaaaaccacagtgggag ctaaactaaatgattattggaatgagaagagaggagagggaacaccaagtacagctgctaaagtcatacctgaggatgac tggacgtgggcacagtgtgataactgtttgaagtggcgacgtctgccattagggttccgctctgaagacctaccagacaa gtggttctgtcatatgaatcctgtagcacaatttaatcgatgtgatattgatgaagaaccagaagatgaagatgaagctt tacaagcaccaacgtacaaaaagacgtacaagaagagagaaaatgaaaggaagttacagataaaacttcaggagaagcag aaatcacaagccagagaaatggccctcatcgccaaagaaaactttctacgcaggaaggaaatggatctgaacaagagaaa ttcagtggtgtccagttcctccccttccaagtcatctacagcacaaaacgaccaggaactccataaaaaagccaaagaac aagagagattgattaagaagttacagcggcagcagaaagagcaagatcgtagaaacaaggaagtccttaataccctaaaa aacaaggaactaccaggtctagaaaagcagattgccaatattattcaaggaacttcttcatcagcagtgtcttccacaag ctcaaataacaagaagaaaggagagattcatgtaaagacagaggacggtgattatataactatagtgaacaatgaagtgg aggaggctcagtcacctgacacatctaatatagtagaccttacagtggattccgataatgaagacattccaccctcaccg aaacgacgcaagaaaagtggcgacaagtccccatcatctccagttgatgtcaaacctgacgttaccaaaataaacaaaaa aattcaggaagccaaaagcagtactcacaaggaacaatcaacgcaaacagttaaaacagaacatgatagagacttggaaa aatctctgaataggtcgagaagacgactgtcagacctacagcacaatgtctacaaactactgaaaatgatcgtaccggat gaggacattggtaccgtagataatattgatgagataaagtataggagacaagttctttctaaaaactcaatggaagaaga taaaaagaagaaagaaaattatttggaaggagactag |
|
Protein
| Protein ID | pfu_aug2.0_216.1_20442.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_216.1_20442.t1 MAFHRGIQTSKVSPSYLHSNSTSHTWAFSAIAELIDNAYDPDVNASELWIDKRDINNIRCLTFLDNGNGMNPDKLHKMLS FGYCEKVSVGNHVPIGHYGNGFKSGSMRLGKDAIVFTRQAHTMSVGLLSQTYLTNIKAETVLVPIVTWSLPNKHRSNNID TTNNLKAITSHSIFRDEKDLLYELEAMEKLGTGTKIIVYSMTRTQDGNYELDFSSDLQDIRNPDTHIMDYSTIHRAIGQK SPKFMTSLREYCSILYLKPRMKIIIRGKKVKTRLISKSLSQTETDVYKPTWSQKPIPIKFGFSRSKNPEDYGIMFYHRNR LIRAYEKVGYQNQPNDLGVGVVGVVQADFLTPTHNKQDFSRDEKYNAFKTTVGAKLNDYWNEKRGEGTPSTAAKVIPEDD WTWAQCDNCLKWRRLPLGFRSEDLPDKWFCHMNPVAQFNRCDIDEEPEDEDEALQAPTYKKTYKKRENERKLQIKLQEKQ KSQAREMALIAKENFLRRKEMDLNKRNSVVSSSSPSKSSTAQNDQELHKKAKEQERLIKKLQRQQKEQDRRNKEVLNTLK NKELPGLEKQIANIIQGTSSSAVSSTSSNNKKKGEIHVKTEDGDYITIVNNEVEEAQSPDTSNIVDLTVDSDNEDIPPSP KRRKKSGDKSPSSPVDVKPDVTKINKKIQEAKSSTHKEQSTQTVKTEHDRDLEKSLNRSRRRLSDLQHNVYKLLKMIVPD EDIGTVDNIDEIKYRRQVLSKNSMEEDKKKKENYLEGD |
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