Gene
| Gene Model ID | pfu_aug2.0_216.1_20445 |
|---|---|
| Locus | scaffold216.1 : 325975 ... 371819 : + |
| To GenomeBrowser | scaffold216.1:325975..371819 |
| Genes list of scaffold | scaffold216.1 |
| Synonym | pfu_aug1.0_1465.1_22603 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger | GO:0003676 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_216.1_20445.t1 | 9 | 1 | zf-H2C2_2 | 538 | 546 | 1.9e-14 | 53.1 | 0.35 | 520.0 | 1.2 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 1 | zf-C2H2_4 | 539 | 560 | 1.4e-12 | 46.9 | 0.00043 | 0.64 | 10.4 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 1 | zf-C2H2 | 539 | 560 | 1.5e-12 | 47.0 | 0.011 | 16.0 | 6.0 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 1 | zf-H2C2_5 | 539 | 547 | 7.3e-07 | 29.0 | 2.9 | 4400.0 | -1.7 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 2 | zf-H2C2_2 | 553 | 572 | 1.9e-14 | 53.1 | 1.6 | 2400.0 | -0.9 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 2 | zf-C2H2_4 | 566 | 588 | 1.4e-12 | 46.9 | 0.014 | 21.0 | 5.7 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 2 | zf-C2H2 | 566 | 588 | 1.5e-12 | 47.0 | 0.034 | 50.0 | 4.5 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 2 | zf-H2C2_5 | 566 | 589 | 7.3e-07 | 29.0 | 3.5e-06 | 0.0051 | 16.9 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 3 | zf-H2C2_2 | 583 | 598 | 1.9e-14 | 53.1 | 0.91 | 1400.0 | -0.1 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 3 | zf-C2H2_4 | 592 | 613 | 1.4e-12 | 46.9 | 0.0053 | 7.8 | 7.0 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 3 | zf-C2H2 | 592 | 613 | 1.5e-12 | 47.0 | 0.0057 | 8.4 | 6.9 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 3 | zf-H2C2_5 | 593 | 612 | 7.3e-07 | 29.0 | 0.0037 | 5.4 | 7.4 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 4 | zf-H2C2_2 | 607 | 628 | 1.9e-14 | 53.1 | 0.0027 | 4.0 | 7.8 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 4 | zf-C2H2_4 | 619 | 641 | 1.4e-12 | 46.9 | 0.00024 | 0.36 | 11.2 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 4 | zf-C2H2 | 619 | 641 | 1.5e-12 | 47.0 | 1.4e-05 | 0.02 | 15.1 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 5 | zf-H2C2_2 | 633 | 659 | 1.9e-14 | 53.1 | 7.3e-05 | 0.11 | 12.8 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 4 | zf-H2C2_5 | 634 | 642 | 7.3e-07 | 29.0 | 4.1 | 6000.0 | -2.2 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 5 | zf-C2H2_4 | 648 | 670 | 1.4e-12 | 46.9 | 1.1e-07 | 0.00016 | 21.7 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 5 | zf-C2H2 | 648 | 670 | 1.5e-12 | 47.0 | 2.3e-08 | 3.5e-05 | 23.8 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 5 | zf-H2C2_5 | 649 | 670 | 7.3e-07 | 29.0 | 0.0046 | 6.8 | 7.1 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 6 | zf-H2C2_2 | 662 | 684 | 1.9e-14 | 53.1 | 4.8e-10 | 7.1e-07 | 29.2 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 6 | zf-C2H2_4 | 676 | 698 | 1.4e-12 | 46.9 | 0.0064 | 9.4 | 6.8 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 6 | zf-C2H2 | 676 | 698 | 1.5e-12 | 47.0 | 0.00042 | 0.62 | 10.5 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 6 | zf-H2C2_5 | 676 | 698 | 7.3e-07 | 29.0 | 8.6e-07 | 0.0013 | 18.8 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 7 | zf-H2C2_2 | 692 | 714 | 1.9e-14 | 53.1 | 0.00013 | 0.2 | 12.0 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 7 | zf-C2H2_4 | 703 | 725 | 1.4e-12 | 46.9 | 0.0012 | 1.8 | 9.0 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 7 | zf-C2H2 | 703 | 725 | 1.5e-12 | 47.0 | 4.9e-05 | 0.073 | 13.4 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 8 | zf-H2C2_2 | 721 | 739 | 1.9e-14 | 53.1 | 1.3e-05 | 0.02 | 15.1 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 7 | zf-H2C2_5 | 721 | 726 | 7.3e-07 | 29.0 | 5.8 | 8600.0 | -2.7 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 8 | zf-C2H2_4 | 731 | 754 | 1.4e-12 | 46.9 | 0.0044 | 6.5 | 7.3 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 8 | zf-C2H2 | 731 | 754 | 1.5e-12 | 47.0 | 0.012 | 18.0 | 5.8 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 8 | zf-H2C2_5 | 731 | 754 | 7.3e-07 | 29.0 | 1.1e-05 | 0.017 | 15.3 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 9 | zf-H2C2_2 | 747 | 771 | 1.9e-14 | 53.1 | 7.3e-05 | 0.11 | 12.8 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 9 | zf-C2H2_4 | 762 | 780 | 1.4e-12 | 46.9 | 0.0059 | 8.8 | 6.9 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 9 | zf-C2H2 | 762 | 783 | 1.5e-12 | 47.0 | 0.016 | 23.0 | 5.5 |
| pfu_aug2.0_216.1_20445.t1 | 9 | 9 | zf-H2C2_5 | 769 | 780 | 7.3e-07 | 29.0 | 4.7 | 6900.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_216.1_20445.t1 | gi|524882638|ref|XP_005097960.1| | PREDICTED: uncharacterized protein LOC101852766 [Aplysia californica] | 0.0 |
| pfu_aug2.0_216.1_20445.t1 | gi|676465115|ref|XP_009057140.1| | hypothetical protein LOTGIDRAFT_190955 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_216.1_20445.t1 | gi|241034194|ref|XP_002406654.1| | zinc finger protein, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_216.1_20445.t1 | gi|675872860|ref|XP_009021990.1| | hypothetical protein HELRODRAFT_113396 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_216.1_20445.t1 | gi|391345110|ref|XP_003746836.1| | PREDICTED: zinc finger protein 189-like [Metaseiulus occidentalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_216.1_20445.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_216.1_20445.t1 atggaagattcgattgataattccgaggatatacagtatcagtcgggagataccattaccattagcctggaggatgcttc ccagctgatgcaggggatagagggaggggttctacctcccggaacataccatatcttgacacaggaggggtatcagctgg gtgatggtagtcttgatggatcagtaggttttacagtggttcagtccatccctgaggggatgacagacataccagaatcc tcaccagggacagttaccatcaaggccaactctactcaaaaaggggcagataattcaaatgttaatggttcagtttctaa agtttctcagccagagccaaatgaaatccatgcagaagttatagtaataccgccaataaaacctcccactccaaaggtca caccaaaatcagtgacaccaaagaacaccacaaagaaggtagacctaagccagccaatagccgtgactcaggagacagaa ataacgttaaatggcaagaaatgtattttacgtccaaatcccacaacaggacagctatgtgcctatccagtgctgccacc tgatgggaagaggaggcgtggccgtccccctaaagcatgggttagtgagagccctgggccacagatctctagttctcttg ggaggagagtggatccggtgctgaaggagaaaagtaaggaccagaccaatgctgtagagggattactagaactgtcaaat acaggtccagatggaatccgacgaagtggaagagctagaaagaaagccaagacattagatgattatgaggtaacagaggt agccagtgacgatgacgggacgaaacaagacattgatgacgaggatgatgatgatgccgctaaggtcatcccaagtctac gtagaaaaataaaattagaagtggaaaacaaagacgtccttaatattacaccctatatcactccagtaaatccagcaaaa agaggaaggggaagacctagacgttatccgcccccggctaacacccccacccagatacctgctgtcatcatccctggggc aaatggacaaactctcatgatggctcctatacaaggattatcaaatttccaagccttccaacagcagatgaagaaattac cagaaataatcacaaaaactcccgtggtttccactattaccattaatccaaccaccgtccctgcatcagtctcgccaacg gaaacggtcaccgctacctctactataaccatggcaacatcaaacagtcccacccctgacctacctcatagcgaagctga tgctataacaactcaatcttcagatgttaccatggaaactattacagcagaaaccagtgtagaatgtacaaatgttacac aggaagaaagtgaagatccaaacaaaaatacagaggaggctgatacgtcagtggaggagtctgtaatggtgaaagaagaa atggcatcaccaatgaaaactgtggaagaaacgagccatgatgatactacagagaagcctgactcagaaaggacaattat acagatacctgaaaatctgttacccatgtttctacctaagaacaatccagtcaaattaggactcaaattctcggagaaag aattagacgagttaaaatgtcagaagtgtgggtaccaagctttctacacccatcagtatcagacccacatagcctctcac gtggatgagacacagaaatgtaaatgctgtagttacgtcacttttgacaaagacagtcttattcagcattttaaggagaa tcatccaaggtgcatatgtcctgagtgcgacttcatggcggagtatgcttatgtgatcaaaagacatatgatgagacata ctgccataggatgtacatgtgacatatgtggaaagacatataaagatcagtacatactgaaaatgcacgtcaagatggta cacatgccagcagaggtcctgtttgaatgtacagtgtgttccaagaagtttacacgtaaagcccatctcaaacgtcatct ccggattcatgaacccgagaaaccatacaaatgcccgcactgcgattacaggggatgtgagagatcagacatatctaaac atatcctgatccatgaggagccacggcatgtatgtgagatctgtggaaaggccttcagacatatgaaaaataaatttctt catctcaaaaggcacagtggacagagggactataagtgtggtgtatgtgatttctttggttatacatttaccgacatcag aaaacacatcgagaggaaacactcggaaatcaaaactttattctgtgataaatgtggtgcagcattcaagtcggaggcca ttctcagggagcaccagaagcagcagtgtgagatgtttatgatagagcaggccctgtctatagctacctccacaggtagt actagtcatgctaccatacagataccctcctccacacttaccatggacagtagacagatagaaaaggctatatcttgtat tttattgttgtag |
|
Protein
| Protein ID | pfu_aug2.0_216.1_20445.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_216.1_20445.t1 MEDSIDNSEDIQYQSGDTITISLEDASQLMQGIEGGVLPPGTYHILTQEGYQLGDGSLDGSVGFTVVQSIPEGMTDIPES SPGTVTIKANSTQKGADNSNVNGSVSKVSQPEPNEIHAEVIVIPPIKPPTPKVTPKSVTPKNTTKKVDLSQPIAVTQETE ITLNGKKCILRPNPTTGQLCAYPVLPPDGKRRRGRPPKAWVSESPGPQISSSLGRRVDPVLKEKSKDQTNAVEGLLELSN TGPDGIRRSGRARKKAKTLDDYEVTEVASDDDGTKQDIDDEDDDDAAKVIPSLRRKIKLEVENKDVLNITPYITPVNPAK RGRGRPRRYPPPANTPTQIPAVIIPGANGQTLMMAPIQGLSNFQAFQQQMKKLPEIITKTPVVSTITINPTTVPASVSPT ETVTATSTITMATSNSPTPDLPHSEADAITTQSSDVTMETITAETSVECTNVTQEESEDPNKNTEEADTSVEESVMVKEE MASPMKTVEETSHDDTTEKPDSERTIIQIPENLLPMFLPKNNPVKLGLKFSEKELDELKCQKCGYQAFYTHQYQTHIASH VDETQKCKCCSYVTFDKDSLIQHFKENHPRCICPECDFMAEYAYVIKRHMMRHTAIGCTCDICGKTYKDQYILKMHVKMV HMPAEVLFECTVCSKKFTRKAHLKRHLRIHEPEKPYKCPHCDYRGCERSDISKHILIHEEPRHVCEICGKAFRHMKNKFL HLKRHSGQRDYKCGVCDFFGYTFTDIRKHIERKHSEIKTLFCDKCGAAFKSEAILREHQKQQCEMFMIEQALSIATSTGS TSHATIQIPSSTLTMDSRQIEKAISCILLL |
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