Gene
| Gene Model ID | pfu_aug2.0_2163.1_12043 |
|---|---|
| Locus | scaffold2163.1 : 50079 ... 54215 : - |
| To GenomeBrowser | scaffold2163.1:50079..54215 |
| Genes list of scaffold | scaffold2163.1 |
| Synonym | pfu_aug1.0_80613.1_56590 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2163.1_12043.t1 | 2 | 1 | Ank_2 | 7 | 101 | 2.7e-26 | 91.7 | 7.6e-21 | 1.9e-17 | 63.3 |
| pfu_aug2.0_2163.1_12043.t1 | 3 | 1 | Ank_4 | 7 | 36 | 4.3e-20 | 71.6 | 0.00013 | 0.33 | 11.5 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 1 | Ank | 7 | 34 | 1.9e-17 | 62.1 | 0.0011 | 2.6 | 7.9 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 1 | Ank_5 | 7 | 35 | 4.7e-16 | 58.4 | 0.39 | 970.0 | 0.2 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 1 | Ank_3 | 7 | 31 | 1.8e-12 | 46.2 | 0.0096 | 24.0 | 5.5 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 2 | Ank_5 | 30 | 75 | 4.7e-16 | 58.4 | 1.7e-10 | 4.2e-07 | 29.9 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 2 | Ank_3 | 38 | 65 | 1.8e-12 | 46.2 | 4.2e-08 | 0.0001 | 22.1 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 2 | Ank | 39 | 67 | 1.9e-17 | 62.1 | 3.3e-12 | 8.2e-09 | 34.8 |
| pfu_aug2.0_2163.1_12043.t1 | 3 | 2 | Ank_4 | 40 | 92 | 4.3e-20 | 71.6 | 1.1e-14 | 2.7e-11 | 43.6 |
| pfu_aug2.0_2163.1_12043.t1 | 2 | 2 | Ank_2 | 68 | 132 | 2.7e-26 | 91.7 | 2.6e-11 | 6.4e-08 | 32.8 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 3 | Ank | 73 | 96 | 1.9e-17 | 62.1 | 8.9e-05 | 0.22 | 11.4 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 3 | Ank_3 | 73 | 99 | 1.8e-12 | 46.2 | 4.7e-05 | 0.12 | 12.7 |
| pfu_aug2.0_2163.1_12043.t1 | 3 | 3 | Ank_4 | 74 | 124 | 4.3e-20 | 71.6 | 5.2e-09 | 1.3e-05 | 25.5 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 3 | Ank_5 | 74 | 112 | 4.7e-16 | 58.4 | 6.4e-09 | 1.6e-05 | 24.9 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 4 | Ank_3 | 105 | 125 | 1.8e-12 | 46.2 | 0.36 | 900.0 | 0.6 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 4 | Ank | 111 | 124 | 1.9e-17 | 62.1 | 0.038 | 94.0 | 3.0 |
| pfu_aug2.0_2163.1_12043.t1 | 4 | 4 | Ank_5 | 115 | 124 | 4.7e-16 | 58.4 | 0.12 | 300.0 | 1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2163.1_12043.t1 | gi|676453657|ref|XP_009053426.1| | hypothetical protein LOTGIDRAFT_144404 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2163.1_12043.t1 | gi|734628024|ref|XP_010742225.1| | PREDICTED: ankyrin repeat domain-containing protein 66 [Larimichthys crocea] | 9.99995e-41 |
| pfu_aug2.0_2163.1_12043.t1 | gi|548392740|ref|XP_005736735.1| | PREDICTED: ankyrin repeat domain-containing protein 66-like [Pundamilia nyererei] | 1.0e-39 |
| pfu_aug2.0_2163.1_12043.t1 | gi|554831252|ref|XP_005926191.1| | PREDICTED: ankyrin repeat domain-containing protein 66-like [Haplochromis burtoni] | 3.0e-39 |
| pfu_aug2.0_2163.1_12043.t1 | gi|498932251|ref|XP_004540139.1| | PREDICTED: ankyrin repeat domain-containing protein 66 [Maylandia zebra] | 9.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_2163.1_12043.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2163.1_12043.t1 atgacctccgggctggagctgcacgaggcagcggccatgggggacaccgactctatggaggagtacctcaacagtaaaaa gattgacgtcaacctcagggatccagacttcaacgatcgtacagctctacactgggccagtgctaaaggttatgttgagt gtataagactcctgttggagcacggtgcagacggcacggccacggctgacatggactggactcccgctcatttcgctgca gagacgggcaagttgacggtcctccgggcattagtacaggccgatataccaatatacagacgggacaagtacggcgacaa accggccgacatcgcacgaatgtacggacatcaagaaatggtcagattcctcaaacaggaagaaataaatcaaaaagcaa agcgtgttcaaaaaggtttacccgccaactctgatgacgaggcagaccctgtcaagatggtcaaagaacaatga |
|
Protein
| Protein ID | pfu_aug2.0_2163.1_12043.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2163.1_12043.t1 MTSGLELHEAAAMGDTDSMEEYLNSKKIDVNLRDPDFNDRTALHWASAKGYVECIRLLLEHGADGTATADMDWTPAHFAA ETGKLTVLRALVQADIPIYRRDKYGDKPADIARMYGHQEMVRFLKQEEINQKAKRVQKGLPANSDDEADPVKMVKEQ |
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