Gene
| Gene Model ID | pfu_aug2.0_2163.1_12044 |
|---|---|
| Locus | scaffold2163.1 : 56903 ... 62455 : - |
| To GenomeBrowser | scaffold2163.1:56903..62455 |
| Genes list of scaffold | scaffold2163.1 |
| Synonym | pfu_aug1.0_46800.1_41389 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2163.1_12044.t1 | 2 | 1 | HECT | 34 | 53 | 9.3e-08 | 31.5 | 0.12 | 1800.0 | -2.3 |
| pfu_aug2.0_2163.1_12044.t1 | 2 | 2 | HECT | 134 | 194 | 9.3e-08 | 31.5 | 1.3e-11 | 2.0e-07 | 30.4 |
Transcript
| Transcript ID | pfu_aug2.0_2163.1_12044.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2163.1_12044.t1 atggcccgtccattcattgagcaatgcttgtatggaaagaactactcctctttacaagaggcattctaccaatatattcc gccttcagagaccattaccttgaagactgccatggattccttcgaagatgcggattatgatgaaatcttagatgtcatgg tactgcatgattctagaaaagtcccgacaagagacacattaccacaattgatagaagaaatggcacataaagagcttatt caggcccctatgtttgtttgtgattgtttccaaccaattttgaaaaatatgattggtgaatctgaactggcggaagcata cagcaggcttactcctacgggaagaagtgtgtcacgcattttgtcatttccggaaaatatgacagcagatgaaatcggca cttccaaccacttgaaaaggttcataaaagaacttacttcggataaactgaagcggtttttgaggttttgtacaggatca gacctattggcagttgaaaagatcactgtcaactttgtaaacgttgctggctttgcaagacgtcccgtggcacatacttg cacctgcatgttggaactgtcgaaagttttcgacagtttcccacagtttcgttcagagtttaattctgtgttagaatcaa actactgggaaatggacttcatctag |
|
Protein
| Protein ID | pfu_aug2.0_2163.1_12044.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2163.1_12044.t1 MARPFIEQCLYGKNYSSLQEAFYQYIPPSETITLKTAMDSFEDADYDEILDVMVLHDSRKVPTRDTLPQLIEEMAHKELI QAPMFVCDCFQPILKNMIGESELAEAYSRLTPTGRSVSRILSFPENMTADEIGTSNHLKRFIKELTSDKLKRFLRFCTGS DLLAVEKITVNFVNVAGFARRPVAHTCTCMLELSKVFDSFPQFRSEFNSVLESNYWEMDFI |
|