Gene
| Gene Model ID | pfu_aug2.0_2163.1_12048 |
|---|---|
| Locus | scaffold2163.1 : 106582 ... 110479 : - |
| To GenomeBrowser | scaffold2163.1:106582..110479 |
| Genes list of scaffold | scaffold2163.1 |
| Synonym | pfu_aug1.0_18557.1_54495 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2163.1_12048.t1 | 3 | 1 | Cu-oxidase_3 | 93 | 202 | 7.90332e-43 | 144.9 | 1.00053e-42 | 5.0e-39 | 132.6 |
| pfu_aug2.0_2163.1_12048.t1 | 2 | 1 | Cu-oxidase_2 | 103 | 201 | 8.1976e-43 | 145.2 | 8.0e-10 | 4.0e-06 | 26.3 |
| pfu_aug2.0_2163.1_12048.t1 | 4 | 1 | Cu-oxidase | 155 | 183 | 6.3e-06 | 26.1 | 0.12 | 610.0 | 0.2 |
| pfu_aug2.0_2163.1_12048.t1 | 4 | 2 | Cu-oxidase | 210 | 228 | 6.3e-06 | 26.1 | 0.031 | 150.0 | 2.1 |
| pfu_aug2.0_2163.1_12048.t1 | 4 | 3 | Cu-oxidase | 239 | 285 | 6.3e-06 | 26.1 | 1.0e-07 | 0.00052 | 19.9 |
| pfu_aug2.0_2163.1_12048.t1 | 3 | 2 | Cu-oxidase_3 | 250 | 273 | 7.90332e-43 | 144.9 | 0.25 | 1200.0 | -0.9 |
| pfu_aug2.0_2163.1_12048.t1 | 2 | 2 | Cu-oxidase_2 | 388 | 558 | 8.1976e-43 | 145.2 | 1.5e-36 | 7.3e-33 | 112.9 |
| pfu_aug2.0_2163.1_12048.t1 | 4 | 4 | Cu-oxidase | 421 | 455 | 6.3e-06 | 26.1 | 0.33 | 1600.0 | -1.2 |
| pfu_aug2.0_2163.1_12048.t1 | 3 | 3 | Cu-oxidase_3 | 517 | 553 | 7.90332e-43 | 144.9 | 0.00036 | 1.8 | 8.3 |
Transcript
| Transcript ID | pfu_aug2.0_2163.1_12048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2163.1_12048.t1 tgcaaaaacctgaggatgattcatctttgctccatcgtcatatccatattgacacatgtaaacgcgcagacgcaaccatg gcctgcctctgatgacccaacctgtcttgaaactacatgcagaaagggagatttggtatgtgaatgtttcttcacaattg agcaccgtttatccatgatgctagaggatgacagaatgcttcttgttcccaggcagggatctgtatacacatccgataga acaaatagaagaatagacgatcctgacgttttaacccttgatggatatagatctagacttgtcatttccatcaatcgaca gtttccgggcccagaaattagagcgtatgaaggtcaaacgtttatacttcatgtatataacgcgatgcacactgacagca cttccattcatttccatggtattcatcagaaaaactctgcttgggctgatggtgttgccttcgttacgcagtgtcctatt cttcccggacagtattttacttataattttacactttctcagcatggtacgtatctgtaccattctcacattggagacca aagatctatgggtttatatggatctttcatcgtatatccaaaagctaaatctgaagactggttggaacatacagttcttc ttcaagactggaaccatgatgatgatcctgaaaccctataccaaagaatgctttttggaacctacgacttaactgacggc ttcgacatagatcctatcgaagtggaatcattcatcatccaaccaggggaacgatttgattttagtctgatggccgatcg tgtttctggaaattacctactcgttgctgaaacattggaaaaatttacttcaacatcagtgtaccacgctgccgaggcag ttattacatataaccaaaacccaggtatcatcaacctacctaaagcaaatggaaatacctgtaccaacagtaacaggtgt aaagtactaaactgtccatttagatattaccctcgtaattcgtatgttgactgcatatctttggacactttgtcgttgga cgatcctacgtttaacatagatacattaggaaacgctgacattgaagaaaaattcttcaattttgcttttccaggcgaaa atggcgtaactcctggctccgtgaatggaagacaatttgtcccacccgtctcgcctattttgtcacaatattcaacctcc tccttaacaccatgcgaagacagtgtgtgtggggaagattcaatttgcagctgcacatatatagaaacaatagagaaaga cgagatataccaattcataatatcgaatataggtgtaggaaggggatggtcgcatccagtacatcttcacggacactcat tttatctactcaaaattggatacggaaattataacctaaacgatgccaccttccgaagcgaaacaaacgatactagatgc tctggaacaaaagcattttgtaacgaaccatcatggagaaatgccagctgggagggaaacaacgtcgaaggactgaatct tgaaaatcctattcttaaagatacagtcatcgtgccatctggtgggtatgtcgtaatacgattcaaggccgataacccgg gtccttggtttttccactgtcatatcgatcttcacaatacaaatggaatgggaatgattatcaacgaggcacctactgcc tattcaacttggataccgaacggattccctgaatgtggaaatttcgaattcgacggaagctttcagtga |
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Protein
| Protein ID | pfu_aug2.0_2163.1_12048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2163.1_12048.t1 CKNLRMIHLCSIVISILTHVNAQTQPWPASDDPTCLETTCRKGDLVCECFFTIEHRLSMMLEDDRMLLVPRQGSVYTSDR TNRRIDDPDVLTLDGYRSRLVISINRQFPGPEIRAYEGQTFILHVYNAMHTDSTSIHFHGIHQKNSAWADGVAFVTQCPI LPGQYFTYNFTLSQHGTYLYHSHIGDQRSMGLYGSFIVYPKAKSEDWLEHTVLLQDWNHDDDPETLYQRMLFGTYDLTDG FDIDPIEVESFIIQPGERFDFSLMADRVSGNYLLVAETLEKFTSTSVYHAAEAVITYNQNPGIINLPKANGNTCTNSNRC KVLNCPFRYYPRNSYVDCISLDTLSLDDPTFNIDTLGNADIEEKFFNFAFPGENGVTPGSVNGRQFVPPVSPILSQYSTS SLTPCEDSVCGEDSICSCTYIETIEKDEIYQFIISNIGVGRGWSHPVHLHGHSFYLLKIGYGNYNLNDATFRSETNDTRC SGTKAFCNEPSWRNASWEGNNVEGLNLENPILKDTVIVPSGGYVVIRFKADNPGPWFFHCHIDLHNTNGMGMIINEAPTA YSTWIPNGFPECGNFEFDGSFQ |
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