Gene
| Gene Model ID | pfu_aug2.0_2167.1_25321 |
|---|---|
| Locus | scaffold2167.1 : 2628 ... 11005 : - |
| To GenomeBrowser | scaffold2167.1:2628..11005 |
| Genes list of scaffold | scaffold2167.1 |
| Synonym | pfu_aug1.0_7593.1_09595 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2167.1_25321.t1 | 1 | 1 | TIR_2 | 134 | 228 | 3.4e-25 | 88.1 | 7.8e-29 | 5.8e-25 | 87.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2167.1_25321.t1 | gi|260826910|ref|XP_002608408.1| | hypothetical protein BRAFLDRAFT_95419 [Branchiostoma floridae] | 3.00004e-41 |
| pfu_aug2.0_2167.1_25321.t1 | gi|260826906|ref|XP_002608406.1| | hypothetical protein BRAFLDRAFT_127607 [Branchiostoma floridae] | 7.00005e-41 |
Transcript
| Transcript ID | pfu_aug2.0_2167.1_25321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2167.1_25321.t1 atgagattaattttgatcaaacttggaatgtttatatatacaggttttcacggccaagtcttgccagctatagatcttaa tgagtctagtggaaatatagagaagcacagtcagaagctaccagtatgggttaaaggtgctgccaaactcctcaacgcag gcgacacaaaccaagactggatagcattggctcatctcatgggtaaagtgtcaattacattctttgttgttattgttata ttcaaagttgatcgagaatttatgactctctactcgatgggtcagatgaagaattattacaggtatatatgtgtggacag actggtttgtggacggatcgtctggggacggatcgactttacctgtggacggactgatcctgatgtcgagcctccccaag tgtttgtcagttatcagtgggactgccaggacgatgttaaagccctcagggaccgcctggagaaatatggattcacatgc tggatggatgtaggacagatgggagggggtgatatactcaatgccaagatagaccagggcatcaggaatgctaaggttat actggcatgtataactcctaagtatgtagtttcccaccattgtaacaaggagttaggtctggcggacctgctgtccaagc ctattatccccattatgtttgaggaggtaccatggcccccgcctggtggaatgtccctcatactgtcacagtatgtctat atcaacatgaaaggagttggaggtcatggaggtacagggattcacgctgacattaaggacaaatacacggagattataca gaaactcatgaattttgtcgtaccagatctgaccaagtactttgataacgacgcgttgagtagtcgagctccgagtcaga acatagatgacctgagtataacgagtgatgacactgtgatacacgtaaacaatgtagctgttcgcacacccagacaacca caaagtcatgctgcacctgcccagaatcaggccccggtacaggaacctaggcatgctccactgggcacagtgcccccaca acaacccccacaggtgtctacaagctgtgtgtgtgttatattatag |
|
Protein
| Protein ID | pfu_aug2.0_2167.1_25321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2167.1_25321.t1 MRLILIKLGMFIYTGFHGQVLPAIDLNESSGNIEKHSQKLPVWVKGAAKLLNAGDTNQDWIALAHLMGKVSITFFVVIVI FKVDREFMTLYSMGQMKNYYRYICVDRLVCGRIVWGRIDFTCGRTDPDVEPPQVFVSYQWDCQDDVKALRDRLEKYGFTC WMDVGQMGGGDILNAKIDQGIRNAKVILACITPKYVVSHHCNKELGLADLLSKPIIPIMFEEVPWPPPGGMSLILSQYVY INMKGVGGHGGTGIHADIKDKYTEIIQKLMNFVVPDLTKYFDNDALSSRAPSQNIDDLSITSDDTVIHVNNVAVRTPRQP QSHAAPAQNQAPVQEPRHAPLGTVPPQQPPQVSTSCVCVIL |
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