Gene
| Gene Model ID | pfu_aug2.0_217.1_23682 |
|---|---|
| Locus | scaffold217.1 : 229257 ... 248098 : - |
| To GenomeBrowser | scaffold217.1:229257..248098 |
| Genes list of scaffold | scaffold217.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 24-hydroxycholesterol 7-alpha-hydroxylase isoform x2 | GO:0005488 GO:0008202 GO:0008395 GO:0016705 GO:0044281 GO:1901615 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_217.1_23682.t1 | 2 | 1 | p450 | 28 | 60 | 1.0e-29 | 103.3 | 0.031 | 460.0 | -1.0 |
| pfu_aug2.0_217.1_23682.t1 | 2 | 2 | p450 | 94 | 225 | 1.0e-29 | 103.3 | 1.9e-33 | 2.9e-29 | 101.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_217.1_23682.t1 | gi|632970133|ref|XP_007901477.1| | PREDICTED: 24-hydroxycholesterol 7-alpha-hydroxylase isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_217.1_23682.t1 | gi|620959750|ref|XP_007665164.1| | PREDICTED: 24-hydroxycholesterol 7-alpha-hydroxylase isoform X2 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_217.1_23682.t1 | gi|727002708|ref|XP_010391527.1| | PREDICTED: 24-hydroxycholesterol 7-alpha-hydroxylase isoform X7 [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_217.1_23682.t1 | gi|620959748|ref|XP_007665163.1| | PREDICTED: 24-hydroxycholesterol 7-alpha-hydroxylase isoform X1 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_217.1_23682.t1 | gi|727002697|ref|XP_010391522.1| | PREDICTED: 24-hydroxycholesterol 7-alpha-hydroxylase isoform X3 [Corvus cornix cornix] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_217.1_23682.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23682.t1 atggttaaagggaggctggcttcctccagactggacaactttacaccaaaactacagaagggatttgaaaaacagtttct gaaatccattggagattatgggtcaggtgatctagtagatattgtaaggaacagtatgtatgcagcagttatggataatc tgtttggagaaaatgtactaccaacaattaatcagaaagaattcatggtaacagccaaacattttataatatttgatgag cagtttgagtatggagctaggctgcctcctctttttctcagaaaagtaccttacctaaaatggtgtatactagaggccat tagacttaagcccgtgggaatcatcacccgtagagttgttaaggcattccaggtcaagggtcagactataccagagggag acatgctgatgctgtcgccgttttgggctcacagaaatcctaaatattttgaaaatcccaaccactataatccagacaga tggaggaatgctgatttagagaagaacttattccttgacggctttgtggcattcggtggtggtagatatcaatgtccagg caggtggtatgctttaatggagatgcagatgtatgtagcaatgtttatatggaagtatgattgctcattgacaaataata aagtcccttcttatagtaggaagcacctggtaggcacccagcagccgtctgaaccgtgcccagtgcaatattcactcagg aaacattga |
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Protein
| Protein ID | pfu_aug2.0_217.1_23682.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23682.t1 MVKGRLASSRLDNFTPKLQKGFEKQFLKSIGDYGSGDLVDIVRNSMYAAVMDNLFGENVLPTINQKEFMVTAKHFIIFDE QFEYGARLPPLFLRKVPYLKWCILEAIRLKPVGIITRRVVKAFQVKGQTIPEGDMLMLSPFWAHRNPKYFENPNHYNPDR WRNADLEKNLFLDGFVAFGGGRYQCPGRWYALMEMQMYVAMFIWKYDCSLTNNKVPSYSRKHLVGTQQPSEPCPVQYSLR KH |
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