Gene
| Gene Model ID | pfu_aug2.0_217.1_23683 |
|---|---|
| Locus | scaffold217.1 : 248369 ... 271960 : + |
| To GenomeBrowser | scaffold217.1:248369..271960 |
| Genes list of scaffold | scaffold217.1 |
| Synonym | pfu_aug1.0_14256.1_68728 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_217.1_23683.t1 | 1 | 1 | Oscp1 | 17 | 190 | 0.0 | 225.3 | 0.0 | 0.0 | 224.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_217.1_23683.t1 | gi|524914226|ref|XP_005111931.1| | PREDICTED: protein OSCP1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_217.1_23683.t1 | gi|676431244|ref|XP_009046187.1| | hypothetical protein LOTGIDRAFT_224648 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_217.1_23683.t1 | gi|148230847|ref|NP_001089281.1| | oxidored-nitro domain-containing protein [Xenopus laevis] | 0.0 |
| pfu_aug2.0_217.1_23683.t1 | gi|634867123|ref|XP_007945823.1| | PREDICTED: protein OSCP1 [Orycteropus afer afer] | 0.0 |
| pfu_aug2.0_217.1_23683.t1 | gi|56118867|ref|NP_001007858.1| | protein OSCP1 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_217.1_23683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23683.t1 atgtcttataaaacacttcctctgttatttatcaatcttggaggcgaaatgatttatatcctagatcagagactgagggc tcaaaatatcccagacgaaaaatcaaagaaagttctacatgacatcatatctacgatgttccacaaaaagttcatggagg aactgtttaagccacagccgttatattccaagaaagccatgaggacggtgtttgacagactggctcacgcctccatcatg agattaaatgctgctagtatggataagctgtatgacttgatgacaatggcatttaaataccagatttcattggctttaca accaagggacataattctgattactcttaaccacatggacgctatacggtcatttgtggacggccagacgaacattcgtc agcaggtggaacatgtatacagacttctcatagaggcatttggatcactatcaatgggagagtttcagcttgtacgacaa acacttttgaatttctttcaagacatgcatatacgggtatcaatatttctgaaagacaaagtacagaatagtaacggcag atttgtcttaccaactggaggtaccctgccatctaaaacagaaatgccaggaactatattgttgtatgatagcactggaa aggcgcgctctgtatcgttccctccaggaggaagctacttaccagcaaaagccgaaggatccttcgatatcaaaggggac agagtcacaaaactaggaacaaatatgtactccgtgagtcgtacagtagaaaccagcggagcgagtcacacaaagtccat acaacaaatgtcagatatagaatcttctacgcctaatccactggccaaagctcaacttgatctattgtcacaattaatag gtagtaaagctatgacctcaaagcaggaaatacggctaaatctgttcaaaaatgacgaggaagaagatcaagccgcctca acaggccctttgcaacctatagctcaagccgagtctaaagtcgtcaatatagatctcaagaagaggaaaaatgatgaact cagcaaaatagcaagtgaattatcggacacgaagatccaggattcaggaccctcggacgatttactagatctaatggata gtgcataa |
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Protein
| Protein ID | pfu_aug2.0_217.1_23683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23683.t1 MSYKTLPLLFINLGGEMIYILDQRLRAQNIPDEKSKKVLHDIISTMFHKKFMEELFKPQPLYSKKAMRTVFDRLAHASIM RLNAASMDKLYDLMTMAFKYQISLALQPRDIILITLNHMDAIRSFVDGQTNIRQQVEHVYRLLIEAFGSLSMGEFQLVRQ TLLNFFQDMHIRVSIFLKDKVQNSNGRFVLPTGGTLPSKTEMPGTILLYDSTGKARSVSFPPGGSYLPAKAEGSFDIKGD RVTKLGTNMYSVSRTVETSGASHTKSIQQMSDIESSTPNPLAKAQLDLLSQLIGSKAMTSKQEIRLNLFKNDEEEDQAAS TGPLQPIAQAESKVVNIDLKKRKNDELSKIASELSDTKIQDSGPSDDLLDLMDSA |
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