Gene
| Gene Model ID | pfu_aug2.0_217.1_23686 |
|---|---|
| Locus | scaffold217.1 : 310671 ... 313328 : - |
| To GenomeBrowser | scaffold217.1:310671..313328 |
| Genes list of scaffold | scaffold217.1 |
| Synonym | pfu_aug1.0_7515.1_52984 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_217.1_23686.t1 | 2 | 1 | Tim17 | 26 | 115 | 7.2e-06 | 26.0 | 1.0e-08 | 7.6e-05 | 22.7 |
| pfu_aug2.0_217.1_23686.t1 | 2 | 2 | Tim17 | 205 | 275 | 7.2e-06 | 26.0 | 0.063 | 460.0 | 0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_217.1_23686.t1 | gi|676487618|ref|XP_009064355.1| | hypothetical protein LOTGIDRAFT_168227 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_217.1_23686.t1 | gi|260784406|ref|XP_002587258.1| | hypothetical protein BRAFLDRAFT_129910 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_217.1_23686.t1 | gi|524873279|ref|XP_005093389.1| | PREDICTED: uncharacterized protein LOC101854933 [Aplysia californica] | 0.0 |
| pfu_aug2.0_217.1_23686.t1 | gi|585703723|ref|XP_006823314.1| | PREDICTED: uncharacterized protein LOC102805559 [Saccoglossus kowalevskii] | 7.9874e-44 |
| pfu_aug2.0_217.1_23686.t1 | gi|146181708|ref|XP_001023273.2| | transmembrane protein, putative [Tetrahymena thermophila SB210] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_217.1_23686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23686.t1 atggatgatgaggagcaggacgacacgggtctagagccagaatggcgggaactactgcgagacgtcacgcggagattcgg gaggaggtttgcgaagggatttttgagtggagtggctctccatgcaggggtgaaattcgtctctgcactcatgaggaatc cctttagggagaatattcctcacactctaagaaatctgatttccacagacagtctgagatttgcctcttttctgggattg tatcccagtgtgtatgagctcgtcaaagaccttgttcaaagataccgtctcaaaaaggatggtttcaacaacactgtagc aggaggaatcgctggcttgacgatcatcctagaggagccgaccaggaggcgtgtcttctgcctctttgccatagcacgat actattactctgtcctaaaatggtccagggattatacggacaaaaagcttagtattcttttccggtcaaagggggacaga tttctgacttgccaggaagtcggtcttcacaaagagggctgcacaacgcatgcgttgaaagatttcattagaagtttccc tggattcgccaagttgtaccttccaattcatataactccaattttagtatttcgaagaaaattattaatggaaaggccac tgagggttctgaaatcactggtgaaaaacgtgatattttcaacagctttcctggcaagcatggcctcgttagccaagtat gttatttgtctcctacgaaaccaaatgggaagaccaccacctcttcccgcatttataccggcaataggtggcgctgtgtg tggactgagtgtgctattcgaacgcgcgaatcggcgcaaggaactgtcactatttctgataccgcacagtttgtatgctt tgtatctgtggggactggagaagaaattactacgacatatacgttttagctctgtagttttattttctgtgtctatgatg tcagtgatgcatgcctatgagagagaaccggaatcactgtcactcctgataaatggtgtacttaaatattttgttggcga gagcagcaatgtacgattacgaccgaaaagagtaaaaacattcagtgaaatgctatcatga |
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Protein
| Protein ID | pfu_aug2.0_217.1_23686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23686.t1 MDDEEQDDTGLEPEWRELLRDVTRRFGRRFAKGFLSGVALHAGVKFVSALMRNPFRENIPHTLRNLISTDSLRFASFLGL YPSVYELVKDLVQRYRLKKDGFNNTVAGGIAGLTIILEEPTRRRVFCLFAIARYYYSVLKWSRDYTDKKLSILFRSKGDR FLTCQEVGLHKEGCTTHALKDFIRSFPGFAKLYLPIHITPILVFRRKLLMERPLRVLKSLVKNVIFSTAFLASMASLAKY VICLLRNQMGRPPPLPAFIPAIGGAVCGLSVLFERANRRKELSLFLIPHSLYALYLWGLEKKLLRHIRFSSVVLFSVSMM SVMHAYEREPESLSLLINGVLKYFVGESSNVRLRPKRVKTFSEMLS |
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