Gene
| Gene Model ID | pfu_aug2.0_217.1_23688 |
|---|---|
| Locus | scaffold217.1 : 340869 ... 354534 : + |
| To GenomeBrowser | scaffold217.1:340869..354534 |
| Genes list of scaffold | scaffold217.1 |
| Synonym | pfu_aug1.0_33406.1_40912 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_217.1_23688.t1 | 1 | 1 | Las1 | 4 | 116 | 2.2e-17 | 63.1 | 2.6e-21 | 3.9e-17 | 62.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_217.1_23688.t1 | gi|524886897|ref|XP_005100039.1| | PREDICTED: ribosomal biogenesis protein LAS1L-like [Aplysia californica] | 1.0e-26 |
| pfu_aug2.0_217.1_23688.t1 | gi|676474734|ref|XP_009060235.1| | hypothetical protein LOTGIDRAFT_229092 [Lottia gigantea] | 2.0e-18 |
| pfu_aug2.0_217.1_23688.t1 | gi|260808075|ref|XP_002598833.1| | hypothetical protein BRAFLDRAFT_212954 [Branchiostoma floridae] | 7.0e-12 |
| pfu_aug2.0_217.1_23688.t1 | gi|637346051|ref|XP_008117418.1| | PREDICTED: ribosomal biogenesis protein LAS1L [Anolis carolinensis] | 4.0e-09 |
| pfu_aug2.0_217.1_23688.t1 | gi|617454633|ref|XP_007569835.1| | PREDICTED: ribosomal biogenesis protein LAS1L [Poecilia formosa] | 4.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_217.1_23688.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23688.t1 atgggtaacgagagaggagagtttgagagtgtgtataagggattgtacagtggagacatagatagacaggtgtatgctgt aggcagatgtcatgtttggaagagtagagttacacacaagttgtctgtagccatagagagtacagccagtctttgtagtg cctgtataactcaccagaaaattctaggcaatccagacttcaacaatcactaccaatcactttgtagtgagtacagtgtg gctcttataagatttgtgaatcatgtgacagagaaaggccagaacagagcattttcagttcctgtacatgttatagctgc agagtcttcatttccaaattcctttatattgatcatgtgtttgtgtgttttcatgcctggtgggaggtctgaattctggg aagcacagctgcaaactatgatgaccatcagacatagagagccagagaaagatcggcccaaggtcaccaaggacgatgtc tgtagtgtgctagatgattatgtacaggaaaggtgtaatacaatgactaaaagttataaaggaaagtatccgaaggtgaa tgctcttggtggcatggaaaaaaatctttctctagacaagtctatggctataggctgtcttctcacagaggactatatgt tgaataatgatggtatataccctacatttgattcctcctcagagtcggatagtgatgtcatagaggttgaagatttgcta ccagtcaaaaacatctttttctggaaaccagttctacaactccttgaacgcacaaaacaactacaactgcttttaacaga aatggttgccatgcacgatgttgagagtctaccagaggcagctataaaccacataaataatctgtcggacatatatcaag gaagagttatctccccattagaaaatgctgatcgacagacctgtaaatcgttgaaagatttacatggcaaagaacacaat gctttcatagaccagatttctcctgaaaactcaagctggacactttgtgataaagatgtctacgatgaagagttgtgtga caccattgaaaatgatattgatatgtctagtccaatggattccaggcaagcacaaatgtctatttggggaaagcaaagag agggaaggcgttaccaatggttggagtga |
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Protein
| Protein ID | pfu_aug2.0_217.1_23688.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23688.t1 MGNERGEFESVYKGLYSGDIDRQVYAVGRCHVWKSRVTHKLSVAIESTASLCSACITHQKILGNPDFNNHYQSLCSEYSV ALIRFVNHVTEKGQNRAFSVPVHVIAAESSFPNSFILIMCLCVFMPGGRSEFWEAQLQTMMTIRHREPEKDRPKVTKDDV CSVLDDYVQERCNTMTKSYKGKYPKVNALGGMEKNLSLDKSMAIGCLLTEDYMLNNDGIYPTFDSSSESDSDVIEVEDLL PVKNIFFWKPVLQLLERTKQLQLLLTEMVAMHDVESLPEAAINHINNLSDIYQGRVISPLENADRQTCKSLKDLHGKEHN AFIDQISPENSSWTLCDKDVYDEELCDTIENDIDMSSPMDSRQAQMSIWGKQREGRRYQWLE |
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