Gene
Gene Model ID | pfu_aug2.0_217.1_23693 |
---|---|
Locus | scaffold217.1 : 390650 ... 405429 : + |
To GenomeBrowser | scaffold217.1:390650..405429 |
Genes list of scaffold | scaffold217.1 |
Synonym | pfu_aug1.0_491.1_43708 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
superoxide dismutase | GO:0004784 GO:0005507 GO:0005634 GO:0005737 GO:0008270 GO:0009410 GO:0010038 GO:0019430 GO:0051597 GO:0055114 GO:0070050 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_217.1_23693.t1 | 1 | 1 | Sod_Cu | 5 | 148 | 0.0 | 168.2 | 0.0 | 0.0 | 168.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_217.1_23693.t1 | gi|56790262|ref|NP_571369.1| | superoxide dismutase [Cu-Zn] [Danio rerio] | 0.0 |
pfu_aug2.0_217.1_23693.t1 | gi|752872840|ref|XP_011253679.1| | PREDICTED: superoxide dismutase [Cu-Zn] [Camponotus floridanus] | 0.0 |
pfu_aug2.0_217.1_23693.t1 | gi|185132317|ref|NP_001117801.1| | superoxide dismutase [Oncorhynchus mykiss] | 0.0 |
pfu_aug2.0_217.1_23693.t1 | gi|390365128|ref|XP_784574.2| | PREDICTED: superoxide dismutase [Cu-Zn] [Strongylocentrotus purpuratus] | 0.0 |
pfu_aug2.0_217.1_23693.t1 | gi|238231799|ref|NP_001154086.1| | Superoxide dismutase [Oncorhynchus mykiss] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_217.1_23693.t1 |
---|---|
Definition | - |
>pfu_aug2.0_217.1_23693.t1 atgtcagttaaagctgtttgtgttttaaaaggagacggtgctgtgacgggaacaattcatttggcacaggaggatggaca ttgtaaagtaactggagaaatcacaggtctagctcctggtcaacatggattccacgtacatcagtttggggacaacacaa atggttgcactagtgctggtccacacttcaatccccatggtaaaacgcatggtgctccaagtgatgaaattaggcatgta ggtgacttgggaaatgtcacagcagatgctagcggcaaggctgttataaacataacagatagtcaagtaacccttactgg acctaattcagtgataggaagaacagtggtggtgcatgcggacattgatgatcttggtaaaggaggtcatgagttgagtt tgactacagggaatgccggagggcgattggcatgcggtgtgatcggtatcaccaagtaa |
Protein
Protein ID | pfu_aug2.0_217.1_23693.t1 |
---|---|
Definition | - |
>pfu_aug2.0_217.1_23693.t1 MSVKAVCVLKGDGAVTGTIHLAQEDGHCKVTGEITGLAPGQHGFHVHQFGDNTNGCTSAGPHFNPHGKTHGAPSDEIRHV GDLGNVTADASGKAVINITDSQVTLTGPNSVIGRTVVVHADIDDLGKGGHELSLTTGNAGGRLACGVIGITK |