Gene
| Gene Model ID | pfu_aug2.0_217.1_23693 |
|---|---|
| Locus | scaffold217.1 : 390650 ... 405429 : + |
| To GenomeBrowser | scaffold217.1:390650..405429 |
| Genes list of scaffold | scaffold217.1 |
| Synonym | pfu_aug1.0_491.1_43708 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| superoxide dismutase | GO:0004784 GO:0005507 GO:0005634 GO:0005737 GO:0008270 GO:0009410 GO:0010038 GO:0019430 GO:0051597 GO:0055114 GO:0070050 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_217.1_23693.t1 | 1 | 1 | Sod_Cu | 5 | 148 | 0.0 | 168.2 | 0.0 | 0.0 | 168.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_217.1_23693.t1 | gi|56790262|ref|NP_571369.1| | superoxide dismutase [Cu-Zn] [Danio rerio] | 0.0 |
| pfu_aug2.0_217.1_23693.t1 | gi|752872840|ref|XP_011253679.1| | PREDICTED: superoxide dismutase [Cu-Zn] [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_217.1_23693.t1 | gi|185132317|ref|NP_001117801.1| | superoxide dismutase [Oncorhynchus mykiss] | 0.0 |
| pfu_aug2.0_217.1_23693.t1 | gi|390365128|ref|XP_784574.2| | PREDICTED: superoxide dismutase [Cu-Zn] [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_217.1_23693.t1 | gi|238231799|ref|NP_001154086.1| | Superoxide dismutase [Oncorhynchus mykiss] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_217.1_23693.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23693.t1 atgtcagttaaagctgtttgtgttttaaaaggagacggtgctgtgacgggaacaattcatttggcacaggaggatggaca ttgtaaagtaactggagaaatcacaggtctagctcctggtcaacatggattccacgtacatcagtttggggacaacacaa atggttgcactagtgctggtccacacttcaatccccatggtaaaacgcatggtgctccaagtgatgaaattaggcatgta ggtgacttgggaaatgtcacagcagatgctagcggcaaggctgttataaacataacagatagtcaagtaacccttactgg acctaattcagtgataggaagaacagtggtggtgcatgcggacattgatgatcttggtaaaggaggtcatgagttgagtt tgactacagggaatgccggagggcgattggcatgcggtgtgatcggtatcaccaagtaa |
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Protein
| Protein ID | pfu_aug2.0_217.1_23693.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_217.1_23693.t1 MSVKAVCVLKGDGAVTGTIHLAQEDGHCKVTGEITGLAPGQHGFHVHQFGDNTNGCTSAGPHFNPHGKTHGAPSDEIRHV GDLGNVTADASGKAVINITDSQVTLTGPNSVIGRTVVVHADIDDLGKGGHELSLTTGNAGGRLACGVIGITK |
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