Gene
| Gene Model ID | pfu_aug2.0_2170.1_02019 |
|---|---|
| Locus | scaffold2170.1 : 1144 ... 18465 : - |
| To GenomeBrowser | scaffold2170.1:1144..18465 |
| Genes list of scaffold | scaffold2170.1 |
| Synonym | pfu_aug1.0_626.1_43754 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| allene oxide synthase-lipoxygenase | GO:0044710 GO:0046872 GO:0051213 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2170.1_02019.t1 | 2 | 1 | PLAT | 11 | 117 | 1.9e-13 | 50.7 | 4.2e-17 | 3.1e-13 | 50.0 |
| pfu_aug2.0_2170.1_02019.t1 | 3 | 1 | Lipoxygenase | 162 | 216 | 2.8026e-45 | 154.5 | 0.014 | 100.0 | 0.6 |
| pfu_aug2.0_2170.1_02019.t1 | 3 | 2 | Lipoxygenase | 221 | 284 | 2.8026e-45 | 154.5 | 6.3e-09 | 4.7e-05 | 21.5 |
| pfu_aug2.0_2170.1_02019.t1 | 2 | 2 | PLAT | 311 | 340 | 1.9e-13 | 50.7 | 1.5 | 11000.0 | -3.3 |
| pfu_aug2.0_2170.1_02019.t1 | 3 | 3 | Lipoxygenase | 391 | 602 | 2.8026e-45 | 154.5 | 3.09995e-41 | 2.3e-37 | 128.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2170.1_02019.t1 | gi|260800484|ref|XP_002595160.1| | hypothetical protein BRAFLDRAFT_118620 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2170.1_02019.t1 | gi|524878178|ref|XP_005095778.1| | PREDICTED: allene oxide synthase-lipoxygenase protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2170.1_02019.t1 | gi|676459489|ref|XP_009055317.1| | hypothetical protein LOTGIDRAFT_209217 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2170.1_02019.t1 | gi|676432594|ref|XP_009046625.1| | hypothetical protein LOTGIDRAFT_224684 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2170.1_02019.t1 | gi|676432587|ref|XP_009046623.1| | hypothetical protein LOTGIDRAFT_171808 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2170.1_02019.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2170.1_02019.t1 atggctcttcactcttcgtcagattttaaagcagttgtcaaaaccggagaccgtttatttgccggaaccgatgcttctgt gaaagtaagatttcataatctttcaggagacaaatcggatgagttagaattggataacatattccataacgattttgaac aaggatcagaagatcatttttacctgaagagtgttcgattttcgggtgaaattgacttcatagaattatggcggggtaac gaagggatagcaccagcatggcttgtagaatggattgaagttctgtccgtttcgaccaaagcatctttcgtatttccgat atttcgatggatacaacatgacagacggtactacataaaacaacatgacacgacgctaccacaggacgaagtctttgctg atcaaagaaaatgggaaattgaggagaaacgatcatgttatgaactaaaatcaaatgccgaaggattgcctgcacaggtg aaaaatattccaggagatgagcaattctcattcagctacagatggaacatcctaaaaatgaagttaaagatgatcgctga caagaaattccagatgcttttttctagcggaaactggaaaggattacaagatcttaagaatgtctacacagagactttcg gaacacctttgggttgtacacgatggaacgatgacatattctttggatggcagagaatcaacagtataaaccattccctc attcaactatgtacagaaatacctgacaaattaggtgtaacagacgagatgttaaggccgttcttggaaggttgttcact acaacaaattatagacaccaaacgactcttcatggttgacctaaaggtgctagaggatctgccatgtagaagtgctgagt acaaagtgagtaatcatacttatcagttcttcaaacaattacaaagagtacactggttctcacaatccgtcagtaagaca aaggaggggatctccaacaccaggctgcagatcccacagcaaaacccagaaacacccaatgcaaaacacagagcagacaa gaacaaaaagagacgcaaaagggacaaggaatgtcaacgcacaacacagaaacatcttacacaaatgactacacataaac caacgagaccagagggcaaccggatggcattttggagaatggacgtccatggtactctaccagaggatctaaaacaaaga ggtgtatactgccgtaacgggaaagttctcccgaattactacttccgggatgacgcaatactgctgtacgaagcaataaa aaattacgtcacaaaatacatcaaactttattatgatacacctgataaaataaaggaagactgggaactgcaaaacttcg gccaagaaataacaaaatccagagatgaagggggatgcggaatactgggtgtaccaaacaatggaaaatttgaaacggca gaccacattattcttgtgtttacaagcatcatatacacctgcagtgttgcgcatgcatcgacaaatttccctcagtatga cgagtacgcctttccaccgaactacccagcgtctatgaccggcgaaccacccaaagacaagagagagctgacggaggatg acatccttagaacgcttccggacaaggaaacgaccctggatattatgacggtgaccaagattctgagtgacagaggaacg aacagtcttggagactttgaagtgcaatatgtgtttgaacccaaagcaaaggaaatcgttgaagaattcagagaagatct gaagaatattagcgcagaaatcaagaagagaaacgagcatagaaatccaaaatacacgtggttagatcccgaggcggtat taatagtaaccaatgaaatcaggagcggaatacagactggaatcactgtgaatggtcagtttaattag |
|
Protein
| Protein ID | pfu_aug2.0_2170.1_02019.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2170.1_02019.t1 MALHSSSDFKAVVKTGDRLFAGTDASVKVRFHNLSGDKSDELELDNIFHNDFEQGSEDHFYLKSVRFSGEIDFIELWRGN EGIAPAWLVEWIEVLSVSTKASFVFPIFRWIQHDRRYYIKQHDTTLPQDEVFADQRKWEIEEKRSCYELKSNAEGLPAQV KNIPGDEQFSFSYRWNILKMKLKMIADKKFQMLFSSGNWKGLQDLKNVYTETFGTPLGCTRWNDDIFFGWQRINSINHSL IQLCTEIPDKLGVTDEMLRPFLEGCSLQQIIDTKRLFMVDLKVLEDLPCRSAEYKVSNHTYQFFKQLQRVHWFSQSVSKT KEGISNTRLQIPQQNPETPNAKHRADKNKKRRKRDKECQRTTQKHLTQMTTHKPTRPEGNRMAFWRMDVHGTLPEDLKQR GVYCRNGKVLPNYYFRDDAILLYEAIKNYVTKYIKLYYDTPDKIKEDWELQNFGQEITKSRDEGGCGILGVPNNGKFETA DHIILVFTSIIYTCSVAHASTNFPQYDEYAFPPNYPASMTGEPPKDKRELTEDDILRTLPDKETTLDIMTVTKILSDRGT NSLGDFEVQYVFEPKAKEIVEEFREDLKNISAEIKKRNEHRNPKYTWLDPEAVLIVTNEIRSGIQTGITVNGQFN |
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