Gene
| Gene Model ID | pfu_aug2.0_2170.1_02022 |
|---|---|
| Locus | scaffold2170.1 : 34437 ... 51185 : - |
| To GenomeBrowser | scaffold2170.1:34437..51185 |
| Genes list of scaffold | scaffold2170.1 |
| Synonym | pfu_aug1.0_4703.1_52340 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| allene oxide synthase-lipoxygenase | GO:0008152 GO:0016491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2170.1_02022.t1 | 2 | 1 | PLAT | 8 | 116 | 1.7e-18 | 67.0 | 3.5e-22 | 1.7e-18 | 67.0 |
| pfu_aug2.0_2170.1_02022.t1 | 2 | 2 | PLAT | 175 | 175 | 1.7e-18 | 67.0 | 0.54 | 2700.0 | -1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2170.1_02022.t1 | gi|390359744|ref|XP_789433.2| | PREDICTED: arachidonate 5-lipoxygenase [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2170.1_02022.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2170.1_02022.t1 atgctcgccagcagcgaagtttacaaaattaccgtcaagacgggtgacagaaagcgcgccggaactgacgccaacgttac gatcgttcttcgagactgcaaaggaaatagcaccaaggaagctaagctggataatttcctcagagacgatttcgaaagag gtagaactgataaattcacggtcaaagacaaaacgaagttagacgaggttcactttatagagctttgcagggacgatgca ggattgttcagtgattggtacgtggatcatgttacggtaacaatcaaaagtagtgaccaggattttgtgtttcctattta tagatggatccgaccaaatttcaagtacagaattgttcacctggatacgttcctgccacaagaggatccccatcaggagc agagacagatagaattagaggagaaaaagaacgtgtatgagtatgaacagaaaataaccgacggcccctctcaggtgaaa aatattccagaagatgagcaattctccttcaatcacaaatggaacatcctcaaaaggaagttaaagatgatcgctgacaa gaaattccagatgctgttttctagcggcaactgggacggattacaacatctgaagaaagtctacacagatacattcggag aacctctgggttgtacacggtggagcaatgacatattctttggatggcagagaatcaacagtatgaatcattccctcgtt cagctgtgtacagaaatacctgacaaagtttag |
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Protein
| Protein ID | pfu_aug2.0_2170.1_02022.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2170.1_02022.t1 MLASSEVYKITVKTGDRKRAGTDANVTIVLRDCKGNSTKEAKLDNFLRDDFERGRTDKFTVKDKTKLDEVHFIELCRDDA GLFSDWYVDHVTVTIKSSDQDFVFPIYRWIRPNFKYRIVHLDTFLPQEDPHQEQRQIELEEKKNVYEYEQKITDGPSQVK NIPEDEQFSFNHKWNILKRKLKMIADKKFQMLFSSGNWDGLQHLKKVYTDTFGEPLGCTRWSNDIFFGWQRINSMNHSLV QLCTEIPDKV |
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