Gene
| Gene Model ID | pfu_aug2.0_2170.1_02025 |
|---|---|
| Locus | scaffold2170.1 : 105096 ... 110139 : + |
| To GenomeBrowser | scaffold2170.1:105096..110139 |
| Genes list of scaffold | scaffold2170.1 |
| Synonym | pfu_aug1.0_9123.1_17429 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| kinesin-like protein kif3a | GO:0001701 GO:0001822 GO:0005524 GO:0005813 GO:0005829 GO:0005876 GO:0005930 GO:0007224 GO:0007368 GO:0007507 GO:0007596 GO:0008017 GO:0008021 GO:0008152 GO:0008544 GO:0008574 GO:0009952 GO:0016939 GO:0019886 GO:0021904 GO:0030507 GO:0030990 GO:0032391 GO:0036334 GO:0042384 GO:0043005 GO:0048260 GO:0050679 GO:0060122 GO:0061024 GO:0070062 GO:0072383 GO:0097542 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2170.1_02025.t1 | 1 | 1 | Kinesin | 87 | 273 | 0.0 | 173.2 | 0.0 | 0.0 | 172.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2170.1_02025.t1 | gi|706104641|ref|XP_010197932.1| | PREDICTED: kinesin-like protein KIF3A, partial [Colius striatus] | 0.0 |
| pfu_aug2.0_2170.1_02025.t1 | gi|697021854|ref|XP_009572506.1| | PREDICTED: kinesin-like protein KIF3A, partial [Fulmarus glacialis] | 0.0 |
| pfu_aug2.0_2170.1_02025.t1 | gi|109944600|emb|CAI72668.1| | kinesin family member 3a [Oryctolagus cuniculus] | 0.0 |
| pfu_aug2.0_2170.1_02025.t1 | gi|527258299|ref|XP_005147410.1| | PREDICTED: kinesin-like protein KIF3A [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_2170.1_02025.t1 | gi|701307342|ref|XP_010014490.1| | PREDICTED: kinesin-like protein KIF3A, partial [Nestor notabilis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2170.1_02025.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2170.1_02025.t1 atgccggtcatgctgtttggacaggcagatttcaacatctctgggcttgggaaaggtactgatcaagctaatactggtac cttgtttgagctgatactgttgtcggaacagtttccggacgattttgaaggtttttcagtgatttcttctctgtcaaatg atgctgaaaaactaaagaattgtgatacgattcttgaaccgaaagcaaatacggagaaaagtggaccggatggtaatgac aatgtaagagtgtgtgtgcgttgtcgacctctaaatgacactgagaagaaacaaggatgcacacagtgtgtagatgtgga tgaggttcgggggactataaccgttaaaagtcctaacgctggtcatggagaggtacccaaaacattcacgtttgacaatg tgttcgggatggcatccaaacaagtggacgtgtacaaccaggtggccaggccgatcgttgactttgtcttagaaggatac aatggtactatatttgcgtacggacagacaggtaccgggaagacgttcaccatggagggggtacgtgccgtaccggagct caggggcgtcattccgaattcctttgcacatatatttggctttatcgcaaaggcagagggagacgcaaggtttctagtca gagtgtcgtatttggagatctacaatgaagaagttcgagatttattgggaaaagaccaacacgccagattagaggtcaaa gagagaccagacgttggagtttacgttaaggatctatcagcgtatgtggtatataatgctgacgatatggatcgtataat gacggtgggaaacaaaaacagttaa |
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Protein
| Protein ID | pfu_aug2.0_2170.1_02025.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2170.1_02025.t1 MPVMLFGQADFNISGLGKGTDQANTGTLFELILLSEQFPDDFEGFSVISSLSNDAEKLKNCDTILEPKANTEKSGPDGND NVRVCVRCRPLNDTEKKQGCTQCVDVDEVRGTITVKSPNAGHGEVPKTFTFDNVFGMASKQVDVYNQVARPIVDFVLEGY NGTIFAYGQTGTGKTFTMEGVRAVPELRGVIPNSFAHIFGFIAKAEGDARFLVRVSYLEIYNEEVRDLLGKDQHARLEVK ERPDVGVYVKDLSAYVVYNADDMDRIMTVGNKNS |
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