Gene
| Gene Model ID | pfu_aug2.0_219.1_30440 |
|---|---|
| Locus | scaffold219.1 : 25090 ... 58325 : - |
| To GenomeBrowser | scaffold219.1:25090..58325 |
| Genes list of scaffold | scaffold219.1 |
| Synonym | pfu_aug1.0_2480.1_30121 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_219.1_30440.t1 | 2 | 1 | Na_H_Exchanger | 4 | 223 | 5.4e-33 | 114.0 | 7.2e-37 | 5.4e-33 | 114.0 |
| pfu_aug2.0_219.1_30440.t1 | 2 | 2 | Na_H_Exchanger | 451 | 496 | 5.4e-33 | 114.0 | 0.3 | 2300.0 | -3.2 |
| pfu_aug2.0_219.1_30440.t1 | 1 | 1 | cNMP_binding | 650 | 753 | 4.2e-21 | 74.5 | 1.1e-24 | 8.5e-21 | 73.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_219.1_30440.t1 | gi|585646582|ref|XP_006811759.1| | PREDICTED: sodium/hydrogen exchanger 10-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_219.1_30440.t1 | gi|676454828|ref|XP_009053808.1| | hypothetical protein LOTGIDRAFT_160411 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_219.1_30440.t1 | gi|676447425|ref|XP_009051403.1| | hypothetical protein LOTGIDRAFT_152631 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_219.1_30440.t1 | gi|148539552|ref|NP_001091927.1| | sperm-specific sodium proton exchanger precursor [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_219.1_30440.t1 | gi|632941740|ref|XP_007886027.1| | PREDICTED: sodium/hydrogen exchanger 10-like [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_219.1_30440.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_219.1_30440.t1 atggctagctttttcacgtgtctattggcacgttatttattcacatatgattgggattggaacatagggatgatgtttgg atccatactgagtgctacagatccagtggctgtggtggcgctactcagagatcttggtgcttccaagcagcttgccatgg tagttgagggggaatcactgctgaacgatggtgctgctattgtgttctttaacgtcttccttaaacttgccgtctcagag cagggcatgagcggtggtgacattgtggtaacctttatacaggtagctttagggggtcccctgtggggattttttatggg caagctgacgttattctggttatccagggtgttcaacgatgctatggtggagattaccatcacactcgcctccacttatc tcacttactacataggagaagagtttcttaaagtttctggtgtacttgcaactgttgttcttggtgttacgataaacgct gaaaaaaccatgataagtcctgaagtggagaagttcttacacaggttctgggagaccctagcttatattgccaatacact gattttcatcatagttggtatggtgatagcagagaaagctatattcgagattcacggtacagactggttctacatgttct cattgtatttcggtatctttgttattaggtgtggggatgatggattggagggggaggaattcaggatctacattcttgtt ttctcttacaagtatcaagtgtactcttctgagttgaaatacatatacatcgtaacatgaatgtctgatatttcaccagc aaagagaatgtctatggctaactcactcagatatctcgagaatatgagggaaaaaactctcaacatgcttcaaacagaca gatttctagctgatgctgagtgggacagtgtagagaaggaaacagagataattgacccgtacaagacaacagaggaggag gcccagatagacgagtcgttagacatacgtccaaactctatctgtccagagtgtgactgtaagctacctgcacagcatac acgtaaagaactcagggatatgactaatgaagctattttacgtatgctcaaagctgaaaagatgagttactggaggcagt ttgagcagggtatgttatctagggaagctgtcagaaaactacaggattgtactgatgtctctgctgacaaaaaaggaaaa ttcattgatgttgatgaaattaagaagagttgggaaattccaatgatttatgaaaaaatgatagtagtgcaaaaaaagat atacttcaagaattgttttcacatactgtgccttgtgattatatttgtgggtatggtagacatcttccagagctatatac tgccagctatttacggagaggaacattccgttatacattacgtagctgtcgttttcacattactccgtgtcgtaaggtta ttacgattgttagagcccttgatgcctgtgttcatgaggcttatcaactacttgatgagtaaacaactgagctatggtta tgatgtgggtagggggtatgtagctggggaggaggaggtcattaagcttatagaccacatggtggatcagaaagacatag ctagaacactaaaacaggctagtgataatggacggcttgatgtcatcagatgtttaggtatgttgacaaagcagcatcca gatatagcattgtcaatcaagactcggcaggcaatcaggagtgtactaaacaatctccgtgacggaatccacgagctgtt gatggacggaatactggaggaggcagagggtcacaaactagagaagatggtagaggagaagatgaagcggttattgaatg cagcaccaagtctaccattacctccaccagacaagatgttaaaccatgtcttctggttgaggaacgaccccaaacttata tcttacattaaggaaaaagccaaactgattacatataactatgaggatgttattatacatgaaggagatcctcctggtgg tatatatatcattgtatcaggaatggtcaggttggagtctacatcacaacctggtaagccaattatattggaggacaagc cgtcaggatctgaacttcacgtcaaggccaatctcatagacttcctcacggcaggaaacgtcctgggagagatgggactt ctgacgaaacgaccaagatctgccactgtaacttgtgaaacagcagtacaggtgctagtaataagccaagatgacatgga aacagctctaaaggaattcaacgacagtgaaccttccttggagtatagattatggcatgtgtgtgctaaccgtatagcta catcagtactgatgaaacaaccatcttaccagggctggactaaggagaaaatcaagttacgtttagagaattcctacttg tttgacgcagaggaatctgacgttttcaccgtggatgccaccatgagtgatgtagtactggtcaatggatatgcagagaa tgcctttaccaaagatcaatttactgggccatgctatattccttggtccgttcttaaactacaattacagactgacaaag gagtcaaaccagttcttctaatcgtccctgcagaagtaggtcaaccaacccataaatcagcgcatgaagcccggcacggt cacggagcctttgttaactccatcagccagctgtgtcttaaacatgcctctacacatcgcaagaacatcatgtccaaatg gaagaaagtacagcaagccagaagcttagggactctgtttaacagaggtcatacagggtctcctaaacattcccctacca tcgtcaacggaggcgctctcaggcaagtggaagaaaacagttctactagctctacggagctttaa |
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Protein
| Protein ID | pfu_aug2.0_219.1_30440.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_219.1_30440.t1 MASFFTCLLARYLFTYDWDWNIGMMFGSILSATDPVAVVALLRDLGASKQLAMVVEGESLLNDGAAIVFFNVFLKLAVSE QGMSGGDIVVTFIQVALGGPLWGFFMGKLTLFWLSRVFNDAMVEITITLASTYLTYYIGEEFLKVSGVLATVVLGVTINA EKTMISPEVEKFLHRFWETLAYIANTLIFIIVGMVIAEKAIFEIHGTDWFYMFSLYFGIFVIRCGDDGLEGEEFRIYILV FSYKYQVYSSELKYIYIVTXMSDISPAKRMSMANSLRYLENMREKTLNMLQTDRFLADAEWDSVEKETEIIDPYKTTEEE AQIDESLDIRPNSICPECDCKLPAQHTRKELRDMTNEAILRMLKAEKMSYWRQFEQGMLSREAVRKLQDCTDVSADKKGK FIDVDEIKKSWEIPMIYEKMIVVQKKIYFKNCFHILCLVIIFVGMVDIFQSYILPAIYGEEHSVIHYVAVVFTLLRVVRL LRLLEPLMPVFMRLINYLMSKQLSYGYDVGRGYVAGEEEVIKLIDHMVDQKDIARTLKQASDNGRLDVIRCLGMLTKQHP DIALSIKTRQAIRSVLNNLRDGIHELLMDGILEEAEGHKLEKMVEEKMKRLLNAAPSLPLPPPDKMLNHVFWLRNDPKLI SYIKEKAKLITYNYEDVIIHEGDPPGGIYIIVSGMVRLESTSQPGKPIILEDKPSGSELHVKANLIDFLTAGNVLGEMGL LTKRPRSATVTCETAVQVLVISQDDMETALKEFNDSEPSLEYRLWHVCANRIATSVLMKQPSYQGWTKEKIKLRLENSYL FDAEESDVFTVDATMSDVVLVNGYAENAFTKDQFTGPCYIPWSVLKLQLQTDKGVKPVLLIVPAEVGQPTHKSAHEARHG HGAFVNSISQLCLKHASTHRKNIMSKWKKVQQARSLGTLFNRGHTGSPKHSPTIVNGGALRQVEENSSTSSTEL |
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