Gene
| Gene Model ID | pfu_aug2.0_219.1_30441 |
|---|---|
| Locus | scaffold219.1 : 68751 ... 97035 : - |
| To GenomeBrowser | scaffold219.1:68751..97035 |
| Genes list of scaffold | scaffold219.1 |
| Synonym | pfu_aug1.0_209346.1_50151 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_219.1_30441.t1 | 1 | 1 | Bac_surface_Ag | 112 | 394 | 2.29953e-42 | 145.6 | 0.0 | 3.39955e-42 | 145.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_219.1_30441.t1 | gi|676426291|ref|XP_009044577.1| | hypothetical protein LOTGIDRAFT_135720, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_219.1_30441.t1 | gi|675876546|ref|XP_009023833.1| | hypothetical protein HELRODRAFT_185880 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_219.1_30441.t1 | gi|260791840|ref|XP_002590935.1| | hypothetical protein BRAFLDRAFT_285241 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_219.1_30441.t1 | gi|585677556|ref|XP_006819162.1| | PREDICTED: sorting and assembly machinery component 50 homolog A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_219.1_30441.t1 | gi|632954149|ref|XP_007892808.1| | PREDICTED: sorting and assembly machinery component 50 homolog [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_219.1_30441.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_219.1_30441.t1 atggcagggcgccaggccaaagtttcaaaaattatagttgaaggagtggagagaacaaaagatgatatcattaagaaagt cagtcagcagctttacaatgccaattcactggaagagatagctgtggcctgtagaaatgtgaaacaagactttctgagat taaatctgttcagagatgtagagataaagcttgatacagcaaaagagaaaaatgctcctaagaactcgtacaatgttatt tttaatgtaaaagaaaagaaaaggtttacaggaggtgtaaatgcagaagtgggcaacaatgaaacgggaattagaggaaa acttcagcttccaaatacatttggaaggggagaggttgcatcccttgattggatttacaaccttgtagggaaggacactg gaggaggtctgaggttgacaaaacctcttggtgcaaatcctgatatcttattaacaacaggttattcacagtatttagcg aactatccttggtcaggattcaaggagagcagcaaaggatttactgtagatctgaagtttccctcggtattcggtgacca cacagtggcttgggaggggacgtggagagatttaagggcagctaccaggaccacatcatatgatgtcagggagcaagctg gacattcactcaaatcaggagtcaagcatacatttgtgagagatgaaagagatgacaaaatacttcccaccacaggggtc tttattaaaacaagtcaggaatttgctggtttgggaggcaatgttgaatttttcaaaaatgaagttgagcttcagctgaa tagaaaattaatttttgatacatcaatacagttatctttagctggtggtgtaatgaaaggattgggaaaagaaccaaaaa ttctcataaacgataaatttttccttggtggtccacagactctacgagggtttgaaacaagaggtgtaggtccatcaagt gaaggaaattcgctgggtggtacagcatattggttagcaggtgcacacttattcagtccattgccgttcaggctgggtaa aggtggatttggagaattgttcagatcacatgcctttgtaaatgctggaaatctaggagaattcgatacagataaaacta caaaagaaaacttgcagcaactgtcggacacgtttcgattagcctttggtctgggtgttgtattacgttag |
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Protein
| Protein ID | pfu_aug2.0_219.1_30441.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_219.1_30441.t1 MAGRQAKVSKIIVEGVERTKDDIIKKVSQQLYNANSLEEIAVACRNVKQDFLRLNLFRDVEIKLDTAKEKNAPKNSYNVI FNVKEKKRFTGGVNAEVGNNETGIRGKLQLPNTFGRGEVASLDWIYNLVGKDTGGGLRLTKPLGANPDILLTTGYSQYLA NYPWSGFKESSKGFTVDLKFPSVFGDHTVAWEGTWRDLRAATRTTSYDVREQAGHSLKSGVKHTFVRDERDDKILPTTGV FIKTSQEFAGLGGNVEFFKNEVELQLNRKLIFDTSIQLSLAGGVMKGLGKEPKILINDKFFLGGPQTLRGFETRGVGPSS EGNSLGGTAYWLAGAHLFSPLPFRLGKGGFGELFRSHAFVNAGNLGEFDTDKTTKENLQQLSDTFRLAFGLGVVLR |
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