Gene
Gene Model ID | pfu_aug2.0_219.1_30447 |
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Locus | scaffold219.1 : 162443 ... 176475 : - |
To GenomeBrowser | scaffold219.1:162443..176475 |
Genes list of scaffold | scaffold219.1 |
Synonym | pfu_aug1.0_1843.1_37146 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_219.1_30447.t1 | 1 | 1 | Reprolysin_3 | 116 | 233 | 1.1e-06 | 29.1 | 5.2e-10 | 3.9e-06 | 27.4 |
Transcript
Transcript ID | pfu_aug2.0_219.1_30447.t1 |
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Definition | - |
>pfu_aug2.0_219.1_30447.t1 atgacgggtcattcctcattattcctcattattcctgatcattcctcatcagttgtcagtttagatgcactatcagattt cacagaacctactgatgttgccgtaatagaggaaacaaaacaaatcaaacttggcaaaaatggattgatgccagaaaatt tggattttaaacttaatcttgttcatggtagtaagcccgtgacactacatttgaatcgaaatggtcttggaaacgaagga aaacaagtggccgttgtcaggagataccgcaacggaacagttgtcatggttcaagaacacattccaaaagtgaaaattga tatacgatataacaatatcgaacactctgatatacaacttagagtcgtcgtttcagagtatataattgctgaccatccgt atgcctttgattggatgtatgagtttttacagccaggacctggtggttctaagctgttggctgtacgaggctgtttacag agatttgtagaatggaaagatatgatcaaagaccagcttccaccccatgatcacgtcatgctcttcaccggacatgacct ttttgaggaatcaacgaatgaccccactgttacaggttacgctcacgtcaggacagtatgtacgtcaaaaagtgcgtcaa tcaatgaagatcatggaggatttggtggtatcacgactgcgacacacgaacttggacatagagagatcaagggacagaac tgtatgagagaagaacctatgaggattcacgaacaagagttccaagaacatatccgtgtacatccaggacagcgaatcga tccgaacactcagtgtcgtgagagactggggaagtcttcatattacggttggggaggaggacttggtcgttttgctgaca tatgtaccaatatggcctgtaagaatggtaaatcacaagagagcttcaacttatactatgctgcaagaggtacctcatgt ggcgacaaaagatggtgcattgatggaagatgcgtgtttgacgaaaaggcaccgacaaaagatgaaagttgtgttcacgg agattccatgaaaccaatagagaattcatcatgtgacatcctaaccgccaggatcccagcaaactgttataaatccaact attcagaattatgttgtgaatcctgtaaaaaggctaacactggaaaaagaggttgtgaatatggagacaagctagcttcc tgtatgttggtcaaacctcagcctcatctttgttatgataaaaagaatgaagggatatgttgttcatcttgttcttctca ttacactggaataaaaggatgtgaatatggagatagaaagattggatgcgattatcgtctctgtcatcttccggaccata aaagagattgctgcttaacatgccagcctaaacaacctcaaaaaccaaaagtggaacagaaacctatagtgattccagaa actacaacgctgactttgacgaccagcaccgaacccttacgaaagcctgttataactacacagactacatctacgcttgc aacaatccaggtcacggcaccaaaacaaattttcgataggcatccgtctatgattaagccacaaagggaaacgatacaaa gtacggataatcaattatatccaatgggtagaaatttctttcttcgtgtttcaaaaataccacacttacacagaaatttg atagttgaatcaaaggtcactgaagtaccatatctccctcctattaccactccgataactactaccgctggtccaatgat actagcaaagaagcaaatatatcaaactaagaatgatatttggaaaaacaataaatcttacaacacagatccaatgttta aggaccttttacaaattcgaagattcatagctccggcagatcaactacaaccggacccgtcaaatccgggaatgtgcata cgaatgaacacaaattacagatatgatataagttgtggatttttatcaaaatggttgtcggtttgcaaggaaactaaatt tgctgactattgttgcgaaccttgcaaaaagaacgatcatgttgcaacacttgaaaaactcttctttcaactgtaa |
Protein
Protein ID | pfu_aug2.0_219.1_30447.t1 |
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Definition | - |
>pfu_aug2.0_219.1_30447.t1 MTGHSSLFLIIPDHSSSVVSLDALSDFTEPTDVAVIEETKQIKLGKNGLMPENLDFKLNLVHGSKPVTLHLNRNGLGNEG KQVAVVRRYRNGTVVMVQEHIPKVKIDIRYNNIEHSDIQLRVVVSEYIIADHPYAFDWMYEFLQPGPGGSKLLAVRGCLQ RFVEWKDMIKDQLPPHDHVMLFTGHDLFEESTNDPTVTGYAHVRTVCTSKSASINEDHGGFGGITTATHELGHREIKGQN CMREEPMRIHEQEFQEHIRVHPGQRIDPNTQCRERLGKSSYYGWGGGLGRFADICTNMACKNGKSQESFNLYYAARGTSC GDKRWCIDGRCVFDEKAPTKDESCVHGDSMKPIENSSCDILTARIPANCYKSNYSELCCESCKKANTGKRGCEYGDKLAS CMLVKPQPHLCYDKKNEGICCSSCSSHYTGIKGCEYGDRKIGCDYRLCHLPDHKRDCCLTCQPKQPQKPKVEQKPIVIPE TTTLTLTTSTEPLRKPVITTQTTSTLATIQVTAPKQIFDRHPSMIKPQRETIQSTDNQLYPMGRNFFLRVSKIPHLHRNL IVESKVTEVPYLPPITTPITTTAGPMILAKKQIYQTKNDIWKNNKSYNTDPMFKDLLQIRRFIAPADQLQPDPSNPGMCI RMNTNYRYDISCGFLSKWLSVCKETKFADYCCEPCKKNDHVATLEKLFFQL |