Gene
| Gene Model ID | pfu_aug2.0_219.1_30450 |
|---|---|
| Locus | scaffold219.1 : 292890 ... 300677 : - |
| To GenomeBrowser | scaffold219.1:292890..300677 |
| Genes list of scaffold | scaffold219.1 |
| Synonym | pfu_aug1.0_170.1_36334 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_219.1_30450.t1 | 1 | 1 | VWA | 1 | 157 | 9.3e-30 | 103.6 | 5.1e-33 | 1.5e-29 | 102.9 |
| pfu_aug2.0_219.1_30450.t1 | 1 | 1 | VWA_2 | 2 | 145 | 6.4e-14 | 52.4 | 3.3e-17 | 9.6e-14 | 51.8 |
| pfu_aug2.0_219.1_30450.t1 | 2 | 1 | Sushi | 175 | 224 | 3.5e-06 | 27.2 | 1.7e-09 | 5.0e-06 | 26.7 |
| pfu_aug2.0_219.1_30450.t1 | 2 | 2 | Sushi | 280 | 297 | 3.5e-06 | 27.2 | 2.4 | 7200.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_219.1_30450.t1 | gi|407186434|gb|AFT63500.1| | Pif97, partial [Crassostrea gigas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_219.1_30450.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_219.1_30450.t1 atggatggttctgacagtatatctaaagaagacttccagatattaaggaatcttcttggtgatctgatagatcagctaaa tataggaccaggtcaaggacgaatgggaatcgtagtttacagtagacttttggcgatggatgttcccctgacgttcgata aagaagtgctgaagcgaatggcggcagacatgccacatcccagagaaggtacaaatactcatcttggaatccaaagaatg aaagaaatgttcagagatagtaatcgtccaaatgtgccaaaggttggtattgttgttacagacggcatctccaaagaaca aactttgacagcacgagaagctaacctcaccaaagcacttggagtgaatatgttttcagtgggagtgggacctcccgagt tcatggatgaggaggagctggacgcgattgcttcatatagtgatcaagtattgatggtggattcatttggaacgctggcc aaagaaataggaaatcttgtcaagcttatttgtccagttgattgtggggagccaaggaaaatgccatttgcccagcttct tccaggacttacaacaaaaggggcggttagagagtaccggtgtaatccgggaactgttagagtggggaatacacatatca aatgtctgcccacaggattttggactcttcaagatttctattgtaaagttcctccggctacacctccccctccaccacca aagaaaggtctttgtgatggatgtgcaatgcagaatggtataggttatgctccccatcctgacgagtgtgacaagtacat cgaatgtgtgtttgatgacgctggttttgtccatccgtcatatagattttgtccatttgggcaatactgggagcaaagac aactgacttgtaaaccatcaatatcggtgaactgcccaaaagtctgcacaacagaagtacatattccatttaatggagac tgcaaggataaatcgacttcccatcataaagtgataaaccataacgtggcagtgacagacggcaattacggatatttcaa tggttttgactctaaactgatcattcgcccaattttaaaattaagagactatacagacattgttataaagatacggtttc aagcagtgacagatggagagatgagaggcttgataagcaccggaaattcgtatggttcaagtctgatggtcgtgaaaagc acagacaatctacattatatgtcaaagtgtggtgcttgtgaaaaaacggtttcttcttttcatcttccaatgaaggctgg acattggaacgagatgtattactcacatgacggcaaaacacttggtggtcaagtgaatggacttcggaacgaaatgtttg caatgcttcctatacaaaacagagagaccggaatccagattggaacagcgccaggctttcaaaactttcacgggttttta gactatgttacgatttacttatgtcgaccagactacaaatag |
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Protein
| Protein ID | pfu_aug2.0_219.1_30450.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_219.1_30450.t1 MDGSDSISKEDFQILRNLLGDLIDQLNIGPGQGRMGIVVYSRLLAMDVPLTFDKEVLKRMAADMPHPREGTNTHLGIQRM KEMFRDSNRPNVPKVGIVVTDGISKEQTLTAREANLTKALGVNMFSVGVGPPEFMDEEELDAIASYSDQVLMVDSFGTLA KEIGNLVKLICPVDCGEPRKMPFAQLLPGLTTKGAVREYRCNPGTVRVGNTHIKCLPTGFWTLQDFYCKVPPATPPPPPP KKGLCDGCAMQNGIGYAPHPDECDKYIECVFDDAGFVHPSYRFCPFGQYWEQRQLTCKPSISVNCPKVCTTEVHIPFNGD CKDKSTSHHKVINHNVAVTDGNYGYFNGFDSKLIIRPILKLRDYTDIVIKIRFQAVTDGEMRGLISTGNSYGSSLMVVKS TDNLHYMSKCGACEKTVSSFHLPMKAGHWNEMYYSHDGKTLGGQVNGLRNEMFAMLPIQNRETGIQIGTAPGFQNFHGFL DYVTIYLCRPDYK |
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