Gene
| Gene Model ID | pfu_aug2.0_219.1_30451 |
|---|---|
| Locus | scaffold219.1 : 323669 ... 334287 : - |
| To GenomeBrowser | scaffold219.1:323669..334287 |
| Genes list of scaffold | scaffold219.1 |
| Synonym | pfu_aug1.0_170.1_36338 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_219.1_30451.t1 | 1 | 1 | VWA | 2 | 158 | 4.4e-28 | 98.1 | 2.7e-31 | 6.7e-28 | 97.5 |
| pfu_aug2.0_219.1_30451.t1 | 1 | 1 | VWA_2 | 2 | 145 | 6.0e-11 | 42.7 | 3.6e-14 | 9.0e-11 | 42.1 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 1 | Sushi | 174 | 221 | 0.0 | 364.4 | 2.4e-08 | 6.0e-05 | 23.3 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 2 | Sushi | 231 | 280 | 0.0 | 364.4 | 2.6e-08 | 6.5e-05 | 23.1 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 1 | CBM_14 | 271 | 286 | 1.1e-06 | 28.4 | 6.0 | 15000.0 | -4.0 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 3 | Sushi | 288 | 337 | 0.0 | 364.4 | 2.9e-10 | 7.3e-07 | 29.4 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 4 | Sushi | 345 | 400 | 0.0 | 364.4 | 2.2e-10 | 5.5e-07 | 29.8 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 2 | CBM_14 | 369 | 401 | 1.1e-06 | 28.4 | 2.2 | 5500.0 | -2.7 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 5 | Sushi | 402 | 451 | 0.0 | 364.4 | 2.1e-06 | 0.0053 | 17.0 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 3 | CBM_14 | 426 | 457 | 1.1e-06 | 28.4 | 3.0 | 7500.0 | -3.1 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 6 | Sushi | 459 | 509 | 0.0 | 364.4 | 3.2e-10 | 8.0e-07 | 29.3 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 7 | Sushi | 516 | 565 | 0.0 | 364.4 | 3.1e-06 | 0.0077 | 16.5 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 8 | Sushi | 573 | 622 | 0.0 | 364.4 | 2.5e-09 | 6.2e-06 | 26.4 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 9 | Sushi | 630 | 679 | 0.0 | 364.4 | 5.0e-07 | 0.0012 | 19.1 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 10 | Sushi | 687 | 737 | 0.0 | 364.4 | 6.2e-10 | 1.5e-06 | 28.4 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 11 | Sushi | 744 | 793 | 0.0 | 364.4 | 2.3e-09 | 5.6e-06 | 26.5 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 12 | Sushi | 801 | 850 | 0.0 | 364.4 | 3.8e-09 | 9.3e-06 | 25.9 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 13 | Sushi | 858 | 911 | 0.0 | 364.4 | 5.7e-12 | 1.4e-08 | 34.9 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 4 | CBM_14 | 879 | 914 | 1.1e-06 | 28.4 | 0.0054 | 13.0 | 5.7 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 14 | Sushi | 915 | 963 | 0.0 | 364.4 | 1.2e-08 | 3.0e-05 | 24.2 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 5 | CBM_14 | 939 | 970 | 1.1e-06 | 28.4 | 0.044 | 110.0 | 2.8 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 15 | Sushi | 972 | 1021 | 0.0 | 364.4 | 1.0e-09 | 2.5e-06 | 27.7 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 6 | CBM_14 | 996 | 1027 | 1.1e-06 | 28.4 | 0.18 | 460.0 | 0.8 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 16 | Sushi | 1029 | 1082 | 0.0 | 364.4 | 2.4e-12 | 5.9e-09 | 36.1 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 7 | CBM_14 | 1053 | 1083 | 1.1e-06 | 28.4 | 3.7 | 9200.0 | -3.4 |
| pfu_aug2.0_219.1_30451.t1 | 17 | 17 | Sushi | 1086 | 1134 | 0.0 | 364.4 | 1.2e-08 | 2.9e-05 | 24.3 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 8 | CBM_14 | 1107 | 1140 | 1.1e-06 | 28.4 | 0.0018 | 4.6 | 7.2 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 9 | CBM_14 | 1168 | 1220 | 1.1e-06 | 28.4 | 4.4e-10 | 1.1e-06 | 28.4 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 10 | CBM_14 | 1235 | 1274 | 1.1e-06 | 28.4 | 4.8e-05 | 0.12 | 12.3 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 11 | CBM_14 | 1311 | 1333 | 1.1e-06 | 28.4 | 0.043 | 110.0 | 2.8 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 12 | CBM_14 | 1351 | 1390 | 1.1e-06 | 28.4 | 9.4e-06 | 0.023 | 14.6 |
| pfu_aug2.0_219.1_30451.t1 | 13 | 13 | CBM_14 | 1427 | 1449 | 1.1e-06 | 28.4 | 0.045 | 110.0 | 2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_219.1_30451.t1 | gi|657737087|ref|XP_008321496.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Cynoglossus semilaevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_219.1_30451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_219.1_30451.t1 atggtttttgacggatcagatagtatatcagctccggatttccagcttcttcgcgagtcagtcgagaaactggtcgacca gctaaatataggagtgggcgagggaagaatgggtatcattgtatacagccgacttgtaaacatgactgtgaatttaacac ataacaagttgaaattgaaagaagatgctcgaataatgcctcatccaaggtcgggtacaaatacagccttaggaatagca gccatgttgaaaatgttcaagtcttccaaccgagacgttccaaaagttggcattgttgttaccgatggtatctctctaga cccagaggaaacggcaaaagaagcaagattatcaaaagactatggaattaatatgttctccgtcggcatcacgaaaaaga ttgaccatgatgagctgaacaaaatcgcttcaaatgaaaatcaggtcctgatgcttgattcctttgatgaattagccagg aatatcggtggcctagtcaagcttgtatgtcctgcggactgtggacaacctcccaaacttccatacactataatggaccc tgggtcgaccattgaaggcacacggaggtcgtacaaatgtgaagcgaacacgatcatggaaggtaaccccgatattgtat gtagcgatgatggaggctggtcagtcacagacttatactgtagacctgactgtaaggagccattacctgttccaaatgcc gtcataagacctggtggtacgcttgagggggcagtacgcacgtatgattgtgaacggacgactgtcctagaaggagaccc caatgttttctgcggcaataacggacaatggtcaaagcataaattctattgtagaccggattgtggacaacccgatttag taccaagagcaacttatcaagttcagtcaacgttagagggtaacgttactagatataagtgtaaccctgacactgttctt gaaggagaacctatcgtcatttgtcaaagtaatggacaatggtctccacctgacttctactgtcgacccaactgtggaaa acctctaaacattccaagagcatcaataccagatggacccacgttagaaggtagtacattggaatatcaatgtcataaaa ataccattatggaaggcaaccctgttatagtatgtggacaagatggaaagtggtcagacagcaacctctactgtagacct gattgtaaagaaccatcaattgttcaaagggctacagtaatgcctggaatgacattagagggagcaagtcgccaatacgt gtgtgaacatggtaccattcttgaaggcgacccaaatgtcatttgtgaaggcagtggtcaatggtcaaagtctaatttct attgtagacctgattgtggaatgccagacccggttccacgaactacatatgaagtacagtcaacttttgagggtaacatt accagatacacatgcttaccgaattcagtgttggaaggagaaccaaccatagtttgccaacattcaggaatatggtcgat tccagaattttactgcagaccggactgtggtctacctatggatgttccaaacgctgcatggttaccaggaccttctcttg aaggcaacgtaaccagctatgtttgtggcataacaactgtcatggaaggaaacccacaagtaatatgccaaaggaatggg gaatggtcaaaaccggaattttactgtagacctgactgtggtattcctgtggatattcctaacgccgcctggaagcctag tccaacccttgaaggagacatgattacatatttctgtgcaagtcataccgtgttggaaggaaattcgacaatcatatgcg gacatgatggacattggtcgataccctcattctattgcagacctgattgtggaatcccaattgatgttccaaatgcaaaa tggctccccggaccttccctggagggaagtgttacatcatataagtgcattggtaacacggtgatggaaggggaccctac atcatcatgtggaaaagatggaaaatggtcacatccaaatttctattgtagaccggactgtggaatacctatcaatgttc caaatgcaaaatgggatgtaggttctactctggaaggaagcacgtcgacctatagttgtattggaactagtgttctggaa ggagatgccagtatcacatgtggcaaagatggacgatggacacctccaacattttattgtagacctgattgtggaaaacc accaccaatacctagagccagacctggtaacggtcccactttggaaggaagccttgttacatacatgtgtgatccaaaga cagtgacagaaggaaatccttcaatactatgtgctggagacggttcttggtcatcaacggacttatattgcaggcctgac tgtggagtacctataaatgtgccccgagcagtcactcctaatggtcccactgtagaaggcagtagactagtctatgagtg ccaaaagaagacgatcctagagggaaattcttccattatttgtgagagtaatggtcagtggacaagaccactgttttatt gcaggcctgattgcggaataccaccagatgttcaaaacgcgatcatagactctggatcgactttagaggaagcatcacga tattatacatgcaaacctggtactgtcttggagggaaatgcagagataagatgtggaagcagtggccagtggtccaaacc tcagtttcgctgcaaatatgattgtggagcaccagtcgtaatacctcgtgcgcatgttgacgagggacttaccacagaag gcgctataagaacttacatgtgtaataatgggaccatcatggaaggatcatcaacagtcacatgtcaagaagatggaact tggagtcctatctctttccagtgcaaacatgactgcggtgagccatatatgattccaaatgcaattgtgagaccaggccc aacggttgaaggatctgttagacaataccaatgtgagaagggcactacgttagaagggaatccagaaataagatgcaaga ataacggaaaatggaccctaacaagtatacgttgtcgtcctgattgtggacctccacctcatgtaccacgaaccactgtg agccatggtgcgacagtagagggtagtgtggctacttataaatgtgactcgcacacaacaatggaaggaaattcaaagat tgtctgcaagaaaaatgggaagtggtccaagcctagtttacaatgtcgaacggattgtggagagcccatgtcagtgcctt atgctgttttattacctggtccaacaacagagggtatgtccagatattacgaatgtagttctggttgtgaaactatagga aacccagaaataagatgcatggaagatggaaagtggacacaaatagaattttattgccatgttgtatcacatccaggacc aaaacctccttcaacactgccacctgttccaggaccatgcgacttctgtaagatgcagtatggagttggattcaatcctc atccagaagattgtgacaagtttacccagtgttactttgatcaaaatggccaagttcaagctgtatttagacaatgcccc tttggtcagtactgggaccaggatgtacttacatgtcggccgtctgagcaggtccagtgtatgcacgaaaaatgtcacat gcccggacttttatcctatccttatggaaacaaaacaagttgcaaggccttctggaaatgtaatcttggtaaatcaatag gcatgtgctgtcccgacggctacgcctatgactctcaccaaggatgtgtgcatgatcctgactgcaaggacacctgcccg cccctcgtatatcacgaaggggcgtgtgatacccgtccgtcatggaagaatccatatggatatcagcaattcattccagg gttaggatggaaggaaatggaatgtgggagtgggtcaaagtatgactgtacatcatgcaaatgtgaataccatgaatctt ttctaccaggaaaagaaaaatgtcacatgcccggacttttatcctatccttatggaaacaaaacaagttgcaaggccttc tggaaatgtaatcttggtaaatcaataggcatgtgctgtcccgacggctacgcctatgactctcaccaaggatgtgtgca tgatcctgactgcaaggacacctgcccgcccctcgtatatcacgaaggggcgtgtgatacccgtccgtcatggaagaatc catatggatatcagcaattcattccagggttaggatggaaggaaatggaatgtgggagtgggtcaaagtatgactgtaca tcatgcaaatgtgaataccatgaatcttttctaccaggaaaagtttgcaaaccggaaatcaacattgctttcgatgatga ctgtttcgatgactctgaccatcattacgaaatagaaaatcacaacataacattaaccgggggaggactggcgtatttta atggaattaactctagacttgtgataccacatattgaaaaaatgaagcattatacagatctcgtggtacgcatgcgctac ctagatgtcccggatgtaggacttcgcggattgattagtaacggtgaatatgactcaccgagcatgatgattgtcaagag taaaaggaaccttcactatatggctaaatgcgaatcaaacagaattacatcattttatttaccaatgagtcctggtaact ggaatgatttaacatttatgcatgacactaagagactagaaggaaaagtgaataatgttagagcagagaaatgggcgttt ggtcatatccaagttcttgattcagcattacagatcggctacgcccctggattccaaaatttccatggttatgtggacta tgtctctatatatctgtgtagaccagatgattag |
|
Protein
| Protein ID | pfu_aug2.0_219.1_30451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_219.1_30451.t1 MVFDGSDSISAPDFQLLRESVEKLVDQLNIGVGEGRMGIIVYSRLVNMTVNLTHNKLKLKEDARIMPHPRSGTNTALGIA AMLKMFKSSNRDVPKVGIVVTDGISLDPEETAKEARLSKDYGINMFSVGITKKIDHDELNKIASNENQVLMLDSFDELAR NIGGLVKLVCPADCGQPPKLPYTIMDPGSTIEGTRRSYKCEANTIMEGNPDIVCSDDGGWSVTDLYCRPDCKEPLPVPNA VIRPGGTLEGAVRTYDCERTTVLEGDPNVFCGNNGQWSKHKFYCRPDCGQPDLVPRATYQVQSTLEGNVTRYKCNPDTVL EGEPIVICQSNGQWSPPDFYCRPNCGKPLNIPRASIPDGPTLEGSTLEYQCHKNTIMEGNPVIVCGQDGKWSDSNLYCRP DCKEPSIVQRATVMPGMTLEGASRQYVCEHGTILEGDPNVICEGSGQWSKSNFYCRPDCGMPDPVPRTTYEVQSTFEGNI TRYTCLPNSVLEGEPTIVCQHSGIWSIPEFYCRPDCGLPMDVPNAAWLPGPSLEGNVTSYVCGITTVMEGNPQVICQRNG EWSKPEFYCRPDCGIPVDIPNAAWKPSPTLEGDMITYFCASHTVLEGNSTIICGHDGHWSIPSFYCRPDCGIPIDVPNAK WLPGPSLEGSVTSYKCIGNTVMEGDPTSSCGKDGKWSHPNFYCRPDCGIPINVPNAKWDVGSTLEGSTSTYSCIGTSVLE GDASITCGKDGRWTPPTFYCRPDCGKPPPIPRARPGNGPTLEGSLVTYMCDPKTVTEGNPSILCAGDGSWSSTDLYCRPD CGVPINVPRAVTPNGPTVEGSRLVYECQKKTILEGNSSIICESNGQWTRPLFYCRPDCGIPPDVQNAIIDSGSTLEEASR YYTCKPGTVLEGNAEIRCGSSGQWSKPQFRCKYDCGAPVVIPRAHVDEGLTTEGAIRTYMCNNGTIMEGSSTVTCQEDGT WSPISFQCKHDCGEPYMIPNAIVRPGPTVEGSVRQYQCEKGTTLEGNPEIRCKNNGKWTLTSIRCRPDCGPPPHVPRTTV SHGATVEGSVATYKCDSHTTMEGNSKIVCKKNGKWSKPSLQCRTDCGEPMSVPYAVLLPGPTTEGMSRYYECSSGCETIG NPEIRCMEDGKWTQIEFYCHVVSHPGPKPPSTLPPVPGPCDFCKMQYGVGFNPHPEDCDKFTQCYFDQNGQVQAVFRQCP FGQYWDQDVLTCRPSEQVQCMHEKCHMPGLLSYPYGNKTSCKAFWKCNLGKSIGMCCPDGYAYDSHQGCVHDPDCKDTCP PLVYHEGACDTRPSWKNPYGYQQFIPGLGWKEMECGSGSKYDCTSCKCEYHESFLPGKEKCHMPGLLSYPYGNKTSCKAF WKCNLGKSIGMCCPDGYAYDSHQGCVHDPDCKDTCPPLVYHEGACDTRPSWKNPYGYQQFIPGLGWKEMECGSGSKYDCT SCKCEYHESFLPGKVCKPEINIAFDDDCFDDSDHHYEIENHNITLTGGGLAYFNGINSRLVIPHIEKMKHYTDLVVRMRY LDVPDVGLRGLISNGEYDSPSMMIVKSKRNLHYMAKCESNRITSFYLPMSPGNWNDLTFMHDTKRLEGKVNNVRAEKWAF GHIQVLDSALQIGYAPGFQNFHGYVDYVSIYLCRPDD |
|