Gene
| Gene Model ID | pfu_aug2.0_220.1_00445 |
|---|---|
| Locus | scaffold220.1 : 4800 ... 67755 : - |
| To GenomeBrowser | scaffold220.1:4800..67755 |
| Genes list of scaffold | scaffold220.1 |
| Synonym | pfu_aug1.0_3769.1_44775 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_220.1_00445.t1 | 9 | 1 | ShK | 72 | 106 | 4.0e-16 | 59.0 | 0.00021 | 0.51 | 10.7 |
| pfu_aug2.0_220.1_00445.t1 | 9 | 2 | ShK | 145 | 179 | 4.0e-16 | 59.0 | 9.7e-05 | 0.24 | 11.7 |
| pfu_aug2.0_220.1_00445.t1 | 9 | 3 | ShK | 214 | 247 | 4.0e-16 | 59.0 | 9.6e-05 | 0.24 | 11.8 |
| pfu_aug2.0_220.1_00445.t1 | 2 | 1 | VWA | 287 | 450 | 0.0 | 209.1 | 1.6e-22 | 3.9e-19 | 69.0 |
| pfu_aug2.0_220.1_00445.t1 | 2 | 1 | VWA_3 | 367 | 425 | 5.5e-09 | 35.8 | 0.00039 | 0.96 | 9.1 |
| pfu_aug2.0_220.1_00445.t1 | 3 | 1 | VWA_2 | 376 | 427 | 8.7e-17 | 61.7 | 1.6e-06 | 0.004 | 17.2 |
| pfu_aug2.0_220.1_00445.t1 | 9 | 4 | ShK | 522 | 556 | 4.0e-16 | 59.0 | 1.9e-06 | 0.0048 | 17.2 |
| pfu_aug2.0_220.1_00445.t1 | 9 | 5 | ShK | 562 | 596 | 4.0e-16 | 59.0 | 1.1e-05 | 0.027 | 14.8 |
| pfu_aug2.0_220.1_00445.t1 | 3 | 2 | VWA_2 | 618 | 699 | 8.7e-17 | 61.7 | 5.5 | 14000.0 | -4.0 |
| pfu_aug2.0_220.1_00445.t1 | 9 | 6 | ShK | 829 | 864 | 4.0e-16 | 59.0 | 0.00052 | 1.3 | 9.4 |
| pfu_aug2.0_220.1_00445.t1 | 9 | 7 | ShK | 908 | 913 | 4.0e-16 | 59.0 | 6.0 | 15000.0 | -4.1 |
| pfu_aug2.0_220.1_00445.t1 | 2 | 2 | VWA_3 | 915 | 1064 | 5.5e-09 | 35.8 | 1.1e-08 | 2.8e-05 | 23.8 |
| pfu_aug2.0_220.1_00445.t1 | 2 | 2 | VWA | 916 | 1088 | 0.0 | 209.1 | 7.00649e-45 | 1.90002e-41 | 141.7 |
| pfu_aug2.0_220.1_00445.t1 | 3 | 3 | VWA_2 | 916 | 1077 | 8.7e-17 | 61.7 | 3.8e-15 | 9.3e-12 | 45.3 |
| pfu_aug2.0_220.1_00445.t1 | 9 | 8 | ShK | 1102 | 1136 | 4.0e-16 | 59.0 | 4.0e-06 | 0.0098 | 16.2 |
| pfu_aug2.0_220.1_00445.t1 | 9 | 9 | ShK | 1144 | 1178 | 4.0e-16 | 59.0 | 3.6e-06 | 0.0089 | 16.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_220.1_00445.t1 | gi|524876640|ref|XP_005095031.1| | PREDICTED: uncharacterized protein LOC101847325 [Aplysia californica] | 9.0e-38 |
| pfu_aug2.0_220.1_00445.t1 | gi|676466739|ref|XP_009057662.1| | hypothetical protein LOTGIDRAFT_121960, partial [Lottia gigantea] | 6.0e-31 |
| pfu_aug2.0_220.1_00445.t1 | gi|542140983|ref|XP_005479624.1| | PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain [Zonotrichia albicollis] | 3.0e-26 |
| pfu_aug2.0_220.1_00445.t1 | gi|697001958|ref|XP_009567069.1| | PREDICTED: collagen alpha-1(XIV) chain [Cuculus canorus] | 5.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_220.1_00445.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00445.t1 atgacccttgcccctgtaatagagaggaccacgcccttaccagtggttaccacgagaacacaatctgcaacaccgtctaa ggcagcgaccacaacgcctactacatcaattgcttctcatgaagtaactactggaacgcggatgtccgcatcgagaacta caggatcaatgactggaataccgacgaccagtttaccaccatcaacatcaggaccatgtttcaataagatagcgaactgc ccagcctatggctctggtgtttgtgtaagctacagggaatggtccattaaaaactgtccacagttctgtcaattctgtat tggaacacctccttcgccaaagccagttacaacattacctaccacaaccacacccatgaccacgacaacaaaggccacgc cacctcaaactccaaagcctatttctgaaggtccctgtatcaatgccatcaacaactgccatgcctatggaactagtgtt tgtacaacgtacagagactggtcagcaaggaattgtcctctgttttgccagttttgtgtaggcaaaccaactccccctag accagtcttaacatctgtgtctctggcaccattaccttccacagcgtcagctgtatttccaagtcctcgctatgagagat gtgaggataaggtagaagtatgtgctacatacggaccagatatgtgtgtgaggaataggcaatgggcgatggttcagtgc gccaaattttgcctgttctgcaacgaaaatgatttcaccacaacactatttgtagaaacagaagctcctacaaaagatta ttgtctgcctagatgtaaatcttcctacgcggatatagcatttttccagaatacaagaaagagtacttccaaatctgact ttgtagatcagaaaaagtttataatcaacttcatttatgcgcttgacgttggacctcaccaggcgcaaatctcttcatcc atactggaaaatcacgacttgcatatttttttcctgaatcaatatgacaacaaaagagaaattcttagcgagatagcttc gctgccttactctaatagcgatgcgccaatggcgataccatttgtcgcttttcgtgatgctgtttttcaacaaaaccatg gagacaggagaacggcgccaaattttgccataatactgacagatggtctattccaatacgcatctgaaactgccttggcc gcaaaacagcttcgcgacgacggagtaaaaatattcgccattggtataggggacaatgtatcagaggatggattgttaaa aatctgtggtgatcgtaaataccttttccatgttagtagttacaatcttttgggaaccatacaacaagctcttgatactc ttttttgtgaaggcacgaacacaacgactacactgctaccaacgacaactgtaacaccgcaaacaactcctccgactaca accataccgtcatcaagtaccacaactccattaacaatcccgcaattgtcattagtaagtacggcctcaacagttccgac aactaattcatcattgcatcttgtaactctagtttcagctaacagttgtaaggataaagtaacatcttgtcagtcatatg gtccaagtgtatgttcagcgtatcacgactgggctgtcgtacaatgcccaaagttttgtggtgtctgtaaagctccattt cagaagtgtaaggataaaatcaaggtttgtgatagatatggtagagatatatgtgtcaatttacaagcttgggctgctgt acagtgtgcaaaattctgtggtttttgtcaagaaaaacaagataaaagtacattacaaccgacaacgacagcaacactga taacatcaatgcctcagacaacgaatacaacagcattgtctctggccgcaacaacatttgtcgcaacaacaaaatcaata acatcagcaacaggaaacttgcttccgaccaaaatatctacacttgaacaaaatacctcaatatcaaaagaaagaagaac aacaacgattatttcaaattcatcaaagcgtccaagccagacgtcatcaatgaccttgacgaaaacagcacaccaaacga caacatcatcaaaactagcaacttcgttttcttcttcaacaattttgccaccaattacgtatacaacattagcagcttct acttctacaaaaactacaacgacaatagcaacggtaactccagctattacaacaaagtcaaaagtgtttctaccaaccac aacaccattacaaactttgaaaatattaccgctgacatccgccgtaactactccaacagccgtacctagaacaaaaccac tatcaacaagaattttaacatcattcgtttcaccatcgacagtgagaacaaaaatgctttcttcagcattgcaatcaaca atcagatcaacaaaaactgtgcctactccaccacctcttctttcaggaggatatctaaccccaccaccactttttcaggg taaatgtagtgacaaccttccaacaagcagatgtgagagttatgggcctgaaatgtgctataaatacagagaatgggcta tgaaagaatgtccaaaattctgccacttttgcaaagcttcgaccactatacctagcacaactgcaacatcaacaacaaaa gggactcaagtgtccggagaatgtatacaaaaacgatttgttttggattcaatatcgaatattgtgaaacctaataatcg atcttattgcaattcctcatatgccgatatagcatttcttctggacaccagcggcagtgagtcaaaggatgacttcctcc atcagaaacagtttatatccaacttcataaatgctttggaggttggacctcaccaggcacaaatttctgccctcaccttt tctaccaacacttatatacaatttttcctgaatgattatgataataaagcagatgttcttgaacatgttaaacagatgaa ctacgtgcaagacaggacgaacacgtggaacgctttgaaagtttcacgtaattacatcttcagaccagacaaaggcgaca gaagaaccgcaccgaattttgtcattatcctaacagatggtcgctcccagtatccatctgataattactacgctgccgaa aaactacgttatgatggagtgacaattttcgccgtgggtatagggactgatgcctcggagaaagaactgttaaacattgg tggagataaagaacatgttttccatgtcaggagtcatgattcattgggggacatacagaaggcgctgcacacactacatt gtgaagcaatggcaggtaccatatgcaataacaagatagggaactgcaatgttttctaccacacgtgttcatccgatatg taccgggtctgggcagaagagaattgtccacaatactgtggattttgcaagccaatggcaggtactttatgtaatgacac aataaaggactgcaatcatttctaccacatgtgcacatctgatatgtacaggcattgggcagaagagaattgtcgacaat actgtggattttgtaatcctgttacaacaccagcaatgccatcatcacagaggaacaccacaaacgtcacgccaattgtc cagacgaacatcattaggaaaacatcagtaacaataccacgtacatctacaagacaaacgacaggtaacgttacacatgt atttgtgtttctcaagtgtagtgtaaatcatccaagaaaggaggggatatccaacaacacccggttgcagcaccaacaac aaaaccccgaaacacccaccactaaaatagaaagcagacacgcaaagaatgagacggaaatggtacaatggacgctaacc cacatggaaacatcaaacataaacgactacacataa |
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Protein
| Protein ID | pfu_aug2.0_220.1_00445.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00445.t1 MTLAPVIERTTPLPVVTTRTQSATPSKAATTTPTTSIASHEVTTGTRMSASRTTGSMTGIPTTSLPPSTSGPCFNKIANC PAYGSGVCVSYREWSIKNCPQFCQFCIGTPPSPKPVTTLPTTTTPMTTTTKATPPQTPKPISEGPCINAINNCHAYGTSV CTTYRDWSARNCPLFCQFCVGKPTPPRPVLTSVSLAPLPSTASAVFPSPRYERCEDKVEVCATYGPDMCVRNRQWAMVQC AKFCLFCNENDFTTTLFVETEAPTKDYCLPRCKSSYADIAFFQNTRKSTSKSDFVDQKKFIINFIYALDVGPHQAQISSS ILENHDLHIFFLNQYDNKREILSEIASLPYSNSDAPMAIPFVAFRDAVFQQNHGDRRTAPNFAIILTDGLFQYASETALA AKQLRDDGVKIFAIGIGDNVSEDGLLKICGDRKYLFHVSSYNLLGTIQQALDTLFCEGTNTTTTLLPTTTVTPQTTPPTT TIPSSSTTTPLTIPQLSLVSTASTVPTTNSSLHLVTLVSANSCKDKVTSCQSYGPSVCSAYHDWAVVQCPKFCGVCKAPF QKCKDKIKVCDRYGRDICVNLQAWAAVQCAKFCGFCQEKQDKSTLQPTTTATLITSMPQTTNTTALSLAATTFVATTKSI TSATGNLLPTKISTLEQNTSISKERRTTTIISNSSKRPSQTSSMTLTKTAHQTTTSSKLATSFSSSTILPPITYTTLAAS TSTKTTTTIATVTPAITTKSKVFLPTTTPLQTLKILPLTSAVTTPTAVPRTKPLSTRILTSFVSPSTVRTKMLSSALQST IRSTKTVPTPPPLLSGGYLTPPPLFQGKCSDNLPTSRCESYGPEMCYKYREWAMKECPKFCHFCKASTTIPSTTATSTTK GTQVSGECIQKRFVLDSISNIVKPNNRSYCNSSYADIAFLLDTSGSESKDDFLHQKQFISNFINALEVGPHQAQISALTF STNTYIQFFLNDYDNKADVLEHVKQMNYVQDRTNTWNALKVSRNYIFRPDKGDRRTAPNFVIILTDGRSQYPSDNYYAAE KLRYDGVTIFAVGIGTDASEKELLNIGGDKEHVFHVRSHDSLGDIQKALHTLHCEAMAGTICNNKIGNCNVFYHTCSSDM YRVWAEENCPQYCGFCKPMAGTLCNDTIKDCNHFYHMCTSDMYRHWAEENCRQYCGFCNPVTTPAMPSSQRNTTNVTPIV QTNIIRKTSVTIPRTSTRQTTGNVTHVFVFLKCSVNHPRKEGISNNTRLQHQQQNPETPTTKIESRHAKNETEMVQWTLT HMETSNINDYT |
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