Gene
| Gene Model ID | pfu_aug2.0_220.1_00448 |
|---|---|
| Locus | scaffold220.1 : 95996 ... 113761 : + |
| To GenomeBrowser | scaffold220.1:95996..113761 |
| Genes list of scaffold | scaffold220.1 |
| Synonym | pfu_aug1.0_229433.1_28683 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium glucose cotransporter 4-like | GO:0006810 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_220.1_00448.t1 | 1 | 1 | SSF | 7 | 273 | 0.0 | 222.3 | 0.0 | 0.0 | 221.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_220.1_00448.t1 | gi|676434845|ref|XP_009047362.1| | hypothetical protein LOTGIDRAFT_230588 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_220.1_00448.t1 | gi|676443401|ref|XP_009050104.1| | hypothetical protein LOTGIDRAFT_141995 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_220.1_00448.t1 | gi|676426195|ref|XP_009044546.1| | hypothetical protein LOTGIDRAFT_185010 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_220.1_00448.t1 | gi|525004857|ref|XP_005050118.1| | PREDICTED: sodium/glucose cotransporter 4 [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_220.1_00448.t1 | gi|548380434|ref|XP_005734286.1| | PREDICTED: sodium/glucose cotransporter 4-like [Pundamilia nyererei] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_220.1_00448.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00448.t1 atgaagtatattcctccagctttaacaaaggcaggcggcatggatggactctgggattcgtacatgacggctgcttccaa cctcactttggccaaccaatcaaaatactcctgtggaatgccgcgtaatgattcctaccatatattccgtgacgccgtta ctgcagacataccctggacgggagccatactaggtctttctattatgggaatgtacacatgggataatgatcaaataata gtccagcgcgcattatccgccaagaatttgacccatgccaaagcaggggccctattcgggggtatattaaaactgactgg ttttatgctcttcatcgtgcccggaatgatcagcaggatcttcttcccagaggagatagcatgcgctgaccccgatgctt gtgatgagatttgccgaaatccagcagggtgttctaacatcgcctatcctttactggtcctgagagtgatgcctacgggt ttacgaggcctaatgttggcggcactcctggctgctcttatgagctcgttgacatcaattctcaatagtgccagttcgat catgactttggatctatggcgtcaatgccggaagaaagcaaaggaaagagaactgatgattgttggcagagttaccgttc ttgttttagtcgtaatcagtataatatggctgcccattctagagcagatacaaggagggatgttttgggtttattttatc tccattcgggcttatctcctcccgcccatgtttatgatgtttttccttggtctaatgtggaaaaggactacggaacaggc tgtcttctgggggcttatgtccagcctcgttgtcggtatcattcgcctcgttctggatttcacatatcctgccccattgt gtggtagtgaagaagcagacgacagacctgcagtagtatcaaagatagaattccttcacttttccaccatcctatcagct tttgcattaatcgttatggtttctatcagtcttgtgacaaaaccacgaccagaacacaagcttcacaaggtcacatggtg gacacgccatgacatagaggaccctgaatttacatcagatgatgaagaaaacgactctgaagatgatgatgtcagtgcaa taaaacttacaccaaaaggagacatgaaagacggacattttgatggagacatattagaatcagcagtcattaaacgacaa gataaaaattcaaatggcacactaaagaacatgccataa |
|
Protein
| Protein ID | pfu_aug2.0_220.1_00448.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00448.t1 MKYIPPALTKAGGMDGLWDSYMTAASNLTLANQSKYSCGMPRNDSYHIFRDAVTADIPWTGAILGLSIMGMYTWDNDQII VQRALSAKNLTHAKAGALFGGILKLTGFMLFIVPGMISRIFFPEEIACADPDACDEICRNPAGCSNIAYPLLVLRVMPTG LRGLMLAALLAALMSSLTSILNSASSIMTLDLWRQCRKKAKERELMIVGRVTVLVLVVISIIWLPILEQIQGGMFWVYFI SIRAYLLPPMFMMFFLGLMWKRTTEQAVFWGLMSSLVVGIIRLVLDFTYPAPLCGSEEADDRPAVVSKIEFLHFSTILSA FALIVMVSISLVTKPRPEHKLHKVTWWTRHDIEDPEFTSDDEENDSEDDDVSAIKLTPKGDMKDGHFDGDILESAVIKRQ DKNSNGTLKNMP |
|