Gene
| Gene Model ID | pfu_aug2.0_220.1_00451 |
|---|---|
| Locus | scaffold220.1 : 155616 ... 161982 : + |
| To GenomeBrowser | scaffold220.1:155616..161982 |
| Genes list of scaffold | scaffold220.1 |
| Synonym | pfu_aug1.0_3044.1_44560 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_220.1_00451.t1 | 4 | 1 | UNC-93 | 30 | 138 | 5.7e-11 | 42.1 | 3.8e-15 | 5.7e-11 | 42.1 |
| pfu_aug2.0_220.1_00451.t1 | 4 | 2 | UNC-93 | 223 | 240 | 5.7e-11 | 42.1 | 0.21 | 3100.0 | -2.5 |
| pfu_aug2.0_220.1_00451.t1 | 4 | 3 | UNC-93 | 318 | 378 | 5.7e-11 | 42.1 | 0.2 | 3000.0 | -2.5 |
| pfu_aug2.0_220.1_00451.t1 | 4 | 4 | UNC-93 | 407 | 446 | 5.7e-11 | 42.1 | 0.0046 | 68.0 | 2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_220.1_00451.t1 | gi|676468616|ref|XP_009058266.1| | hypothetical protein LOTGIDRAFT_178791 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_220.1_00451.t1 | gi|676468622|ref|XP_009058268.1| | hypothetical protein LOTGIDRAFT_163509 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_220.1_00451.t1 | gi|395535278|ref|XP_003769656.1| | PREDICTED: protein unc-93 homolog A [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_220.1_00451.t1 | gi|395535293|ref|XP_003769663.1| | PREDICTED: protein unc-93 homolog A-like [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_220.1_00451.t1 | gi|126311284|ref|XP_001381599.1| | PREDICTED: protein unc-93 homolog A-like [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_220.1_00451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00451.t1 atggaagcagaaacatcgctagttcaacacgaagcggttcgtcctgtattgtccaaattcgctatactacggaatgtatg tgtcgtcagtgtagtgtttttatttttgtttacatcctttcaatctttccaaaatttacaaagcacactgaacaaggaag aagggttaggaccgattactctagccattctgtacttcagtttgatcgtgtcctcgttgtttctaccttcatttttgata gcaaaatttggatgtaagtggacgctttcgttttccattttatgctacgttgtctatatgctggccaatttttggccgat gtgggccactttggttccggcctctgtcgtcattggtattggcgccgcgccactttggtccgccaagtccacgtatttgt cacagcttgccaaagcgtacgctggacttaccgacagaactggtgatgacgtcaacaacttatttttcggaattttcttt atgactttccagacaagtcaaatatggggaaacataatttcttcctccattttcaaacagaacatcgaagaggcggaaat cctgaactcctcttcgcttctctgtggcgcctcctttaatccaagtcaatcgatagaaaccattggtttaaaaagacccg atgataacaaggttcaacttctatgttggatttattttggttcttctatgcttgcttttgtgatagccttgtttgtgaca aatacagcatcggactcccagcaagatccgggtacttcccatgggattctatttatagaaacctttcgtcatctctgcag ttctggataccagaaactgctgattccattaaccgtttacagcggactcgaacagggttttattagtgcggattatacaa agtcgtacattagttgcactattgggatatggaacatcggttacgtcatgatttgttatggcgtgacagacgccatactg tccctaacgttcggagctctagtaaaatgggtggggcatactccattcttcgttttagcttttatagtacatggtggaac acaaatatttctgttgctatgggaacccaacaatgccgattacgtcatatttttcgtcatcgctggattatggggaatgg gtgacgcagtgattcagacacagataaacgccctgtacggagacctgtttgaagaccgtcgtccggcagctttctctaac tacagactgtgggagtccgtggggttcatcatcagtttcgcctataattccttcttcgtgacgtcagtaaaaatatacgt cctaatggcgttcctcactgtaggaatgacgttatactgcgtcattgaaataaacagatatctggagagaagacgtaatg ccgtggtctaa |
|
Protein
| Protein ID | pfu_aug2.0_220.1_00451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00451.t1 MEAETSLVQHEAVRPVLSKFAILRNVCVVSVVFLFLFTSFQSFQNLQSTLNKEEGLGPITLAILYFSLIVSSLFLPSFLI AKFGCKWTLSFSILCYVVYMLANFWPMWATLVPASVVIGIGAAPLWSAKSTYLSQLAKAYAGLTDRTGDDVNNLFFGIFF MTFQTSQIWGNIISSSIFKQNIEEAEILNSSSLLCGASFNPSQSIETIGLKRPDDNKVQLLCWIYFGSSMLAFVIALFVT NTASDSQQDPGTSHGILFIETFRHLCSSGYQKLLIPLTVYSGLEQGFISADYTKSYISCTIGIWNIGYVMICYGVTDAIL SLTFGALVKWVGHTPFFVLAFIVHGGTQIFLLLWEPNNADYVIFFVIAGLWGMGDAVIQTQINALYGDLFEDRRPAAFSN YRLWESVGFIISFAYNSFFVTSVKIYVLMAFLTVGMTLYCVIEINRYLERRRNAVV |
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