Gene
| Gene Model ID | pfu_aug2.0_220.1_00452 |
|---|---|
| Locus | scaffold220.1 : 162017 ... 165075 : - |
| To GenomeBrowser | scaffold220.1:162017..165075 |
| Genes list of scaffold | scaffold220.1 |
| Synonym | pfu_aug1.0_3044.1_44561 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_220.1_00452.t1 | 2 | 1 | HSP70 | 152 | 417 | 1.8e-12 | 45.9 | 7.9e-14 | 5.8e-10 | 37.7 |
| pfu_aug2.0_220.1_00452.t1 | 2 | 2 | HSP70 | 475 | 550 | 1.8e-12 | 45.9 | 0.0049 | 37.0 | 2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_220.1_00452.t1 | gi|466084705|ref|XP_004285347.1| | PREDICTED: heat shock 70 kDa protein 12B isoform X2 [Orcinus orca] | 0.0 |
| pfu_aug2.0_220.1_00452.t1 | gi|472357218|ref|XP_004398238.1| | PREDICTED: heat shock 70 kDa protein 12B isoform X3 [Odobenus rosmarus divergens] | 0.0 |
| pfu_aug2.0_220.1_00452.t1 | gi|594697534|ref|XP_007195923.1| | PREDICTED: heat shock 70 kDa protein 12B isoform X3 [Balaenoptera acutorostrata scammoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_220.1_00452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00452.t1 atgtccacgttgatggtggcggccattgattttggtactacgttctctggttatgcctttgccttcaaagcagacctgca aaatgacaaactgaagatacaaaccaaccaggcgtggaatggaggtcaacagaaactcatctccctaaagacgccaactt gtcttctgctagaccggaacaggaagttcgtgtcgtttggttacgaggctgagactgagtacacagaaattctactggac gaagataaagatcacaatgatttttattacttcaaccggttcaaaatggaactacacggatcaagggtgatttccactga tatgaaactccgggaggcaggagggaaagaacttcgtgcgatgacggtgttttccgaatctataggggctttgaagaaac acctggatgatttactggacttgaggggtacaacaatagaccccgatgagatagagtgggtgttgacagtaccagccatt tggacggactccgcaaaacaattcatgaggaaagcttgtgtagaggcaggaattaaggaccatctacttcgtatcgccct ggaacctgaagctgcatccatttactgtcagcatctaccgaccgagcgcctcggtggagcagagaagggcttctcggtat ccacggtgggcactcggtacatggtcatagaccttggtggtggaacagcggatattaccgtccatgaaaaactagacagt ggaagactgcgcgagatttacagagcaagcgggggagcgagtggcggaacggctgttgacgaatgctttctcgaactttt ccgtaaattattcggaaacgaagtcatgcagattttaaaagacgaaaaagtagaggcttacactgaccttgttcgggaat ttgaggttacgaagcgaaatgttaagccgaataataatggaaaaatcagcatgatgattccttatataactattgaagag ctatgtcagtctattcatggtaaaggtttgaaggaggttctcgcaaagtcggtgatggcgaaacacgttggagtgacggg gaataaactaagatttgagagtcaagtgatggagggaatttttcgtgcagttacaagtgaaattatagagtacatcacac ttgttctgggtcagccggaagtacaaggcgtagaacgatttctgttggttggcggattttctgaaagtgccatggtccag aatgcaatccgtgacgcgtttcctggaaagcggctgataattcccgatgagcccggactggcagttctaaagggggcggt tctctacggtaacgaaccccagacgatttccgagaggtccatcaagtattcctatggggtaaaaacggcgccagaatttg acgagaagaggcatgaccctaaaaggaaattcgaatctggcgggaagacaaggtgctctagtgtcttcagttcattcatg catgccaacactgtagtcccaatcaacgcggaagtcgtgaaaaaataccaaacaaatgaggcatatcaaaagattctacc gatagaagtattttacagcatatcggacgatccgcgttacacagatgagtcgtgcgtacaaagacttggcatcatggagg tagagatccccaatccgtcaaaggagcgccgtaaagtggaggtgcacttcttctttggtggaacggaaatggaaattgtg gcactggacttggaaacaaacacaccgtgtgaatattctttcaatttgttgtcatga |
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Protein
| Protein ID | pfu_aug2.0_220.1_00452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00452.t1 MSTLMVAAIDFGTTFSGYAFAFKADLQNDKLKIQTNQAWNGGQQKLISLKTPTCLLLDRNRKFVSFGYEAETEYTEILLD EDKDHNDFYYFNRFKMELHGSRVISTDMKLREAGGKELRAMTVFSESIGALKKHLDDLLDLRGTTIDPDEIEWVLTVPAI WTDSAKQFMRKACVEAGIKDHLLRIALEPEAASIYCQHLPTERLGGAEKGFSVSTVGTRYMVIDLGGGTADITVHEKLDS GRLREIYRASGGASGGTAVDECFLELFRKLFGNEVMQILKDEKVEAYTDLVREFEVTKRNVKPNNNGKISMMIPYITIEE LCQSIHGKGLKEVLAKSVMAKHVGVTGNKLRFESQVMEGIFRAVTSEIIEYITLVLGQPEVQGVERFLLVGGFSESAMVQ NAIRDAFPGKRLIIPDEPGLAVLKGAVLYGNEPQTISERSIKYSYGVKTAPEFDEKRHDPKRKFESGGKTRCSSVFSSFM HANTVVPINAEVVKKYQTNEAYQKILPIEVFYSISDDPRYTDESCVQRLGIMEVEIPNPSKERRKVEVHFFFGGTEMEIV ALDLETNTPCEYSFNLLS |
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