Gene
| Gene Model ID | pfu_aug2.0_220.1_00460 |
|---|---|
| Locus | scaffold220.1 : 327625 ... 334991 : + |
| To GenomeBrowser | scaffold220.1:327625..334991 |
| Genes list of scaffold | scaffold220.1 |
| Synonym | pfu_aug1.0_7369.1_52941 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serotonin receptor | GO:0004930 GO:0007186 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_220.1_00460.t1 | 2 | 1 | 7tm_1 | 52 | 64 | 0.0 | 285.2 | 1.7 | 4100.0 | -3.4 |
| pfu_aug2.0_220.1_00460.t1 | 2 | 1 | 7TM_GPCR_Srsx | 66 | 232 | 2.5e-12 | 46.5 | 1.6e-13 | 4.1e-10 | 39.2 |
| pfu_aug2.0_220.1_00460.t1 | 1 | 1 | 7TM_GPCR_Srx | 66 | 189 | 2.3e-07 | 30.2 | 3.0e-10 | 7.4e-07 | 28.5 |
| pfu_aug2.0_220.1_00460.t1 | 2 | 2 | 7tm_1 | 72 | 395 | 0.0 | 285.2 | 0.0 | 0.0 | 285.2 |
| pfu_aug2.0_220.1_00460.t1 | 2 | 2 | 7TM_GPCR_Srsx | 318 | 409 | 2.5e-12 | 46.5 | 0.0011 | 2.8 | 7.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_220.1_00460.t1 | gi|676494293|ref|XP_009066515.1| | hypothetical protein LOTGIDRAFT_108926 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_220.1_00460.t1 | gi|524892920|ref|XP_005102983.1| | PREDICTED: 5-hydroxytryptamine receptor 2B-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_220.1_00460.t1 | gi|214165163|gb|ACJ63458.1| | serotonin receptor [Aplysia californica] | 0.0 |
| pfu_aug2.0_220.1_00460.t1 | gi|675888374|ref|XP_009029689.1| | hypothetical protein HELRODRAFT_181653 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_220.1_00460.t1 | gi|675870136|ref|XP_009020628.1| | hypothetical protein HELRODRAFT_81881, partial [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_220.1_00460.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00460.t1 atggcagacacaataagctatgcttctaattcgaataccacaagtttaaccgtggaatcgaacgttaccattagtatcaa ctctactgtaactaacaactggagcacgagtaccacagaggcatcaccgagatccctggaatcaccatacgaagtttggg tacaatctgtcattatcattttggtacttttactcataataggaacaattataggaaactgtctcgtctgcattgctgtt gctatagtaaaacgcttacggacaccgtctaattatttgatcctttccctggcggtttcagacttgttagttgctcttct ggtcatgccatttgcggccacgatggatgttttggggtactggccgctaggacatatcgtctgtgatttgtttacgtcat tagaccttattctctgcactgcatccatattgaatctgtgcatgatcagtgttgatagatattttgtcattacgcggccg ttcaagtacgccatgaagcgcacgccgaagcgtatgggaatcatgatagcgatagtatgggttatgtccgtgttgatttc tgtgccgccgttgctcggatggagagatgataagatccagtatgagtgccacatcagtcaggaaatcgcataccagatct atgcaactttgtgtgccttctatataccgttaatggcgatgatttttgtgtattaccgaatatggaaggtatcggcccga ctcgcgaaaaagacaagtgtatcgcaacccggaagcatcgatagaggaaatgatgtgttatttttaccttccacaaaatc gtcgagaagcagcgggcaaagcgatgcaagtactaatcacgcgaacggattcctcaaaaacggaaaccacgaagtgaatg acgccgaggatgcgccgcttgatatgctttcgcacaacaaaaatcataatacgcgcagacgttttacaataaaatccctt ctgtctcgtagcaataataaatcagcagcgcacaaggacacccgagcgacccgaactttaggtttcattatgggaggatt tattttatgttggttaccgttctttattctggcggtagtgcgaccgatttgtgacttgaataactcgtgttccatcccac cacggctattttccttatttacgtggctagggtacacgaattcgttttggaatcctctgatttacgcacgtttcaacaga gattttagaactcctttcaaagaaattatgtgcttacgttgtaaaggaattaataatagattgcgatcggttatatatgt agaacaatatggacccgatcctacgtatcgggatagcctcaaaccgacaacagacacacatgtgcgttataatagtcaag ggcaaaccgtcgtacacttaggtaatggaaatgtcaaacctgacgatgaaacgaggatacgcctaattgctgctgctgtg aattatccagggtacaggtga |
|
Protein
| Protein ID | pfu_aug2.0_220.1_00460.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_220.1_00460.t1 MADTISYASNSNTTSLTVESNVTISINSTVTNNWSTSTTEASPRSLESPYEVWVQSVIIILVLLLIIGTIIGNCLVCIAV AIVKRLRTPSNYLILSLAVSDLLVALLVMPFAATMDVLGYWPLGHIVCDLFTSLDLILCTASILNLCMISVDRYFVITRP FKYAMKRTPKRMGIMIAIVWVMSVLISVPPLLGWRDDKIQYECHISQEIAYQIYATLCAFYIPLMAMIFVYYRIWKVSAR LAKKTSVSQPGSIDRGNDVLFLPSTKSSRSSGQSDASTNHANGFLKNGNHEVNDAEDAPLDMLSHNKNHNTRRRFTIKSL LSRSNNKSAAHKDTRATRTLGFIMGGFILCWLPFFILAVVRPICDLNNSCSIPPRLFSLFTWLGYTNSFWNPLIYARFNR DFRTPFKEIMCLRCKGINNRLRSVIYVEQYGPDPTYRDSLKPTTDTHVRYNSQGQTVVHLGNGNVKPDDETRIRLIAAAV NYPGYR |
|