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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_220.1_00462
Locus scaffold220.1 : 376873 ... 388225 : +
To GenomeBrowser scaffold220.1:376873..388225
Genes list of scaffold scaffold220.1
Synonym pfu_aug1.0_34714.1_55508

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_220.1_00462.t1 gi|260801465|ref|XP_002595616.1| hypothetical protein BRAFLDRAFT_117517 [Branchiostoma floridae] 4.0e-07
pfu_aug2.0_220.1_00462.t1 gi|585679531|ref|XP_006819533.1| PREDICTED: uncharacterized protein LOC102800823, partial [Saccoglossus kowalevskii] 5.0e-07
pfu_aug2.0_220.1_00462.t1 gi|260786147|ref|XP_002588120.1| hypothetical protein BRAFLDRAFT_87641 [Branchiostoma floridae] 5.0e-07
pfu_aug2.0_220.1_00462.t1 gi|585667775|ref|XP_006817375.1| PREDICTED: uncharacterized protein LOC100370312 [Saccoglossus kowalevskii] 7.0e-07
pfu_aug2.0_220.1_00462.t1 gi|585699408|ref|XP_006822759.1| PREDICTED: uncharacterized protein LOC102806143, partial [Saccoglossus kowalevskii] 8.0e-07

Transcript
Transcript IDpfu_aug2.0_220.1_00462.t1
Definition-
>pfu_aug2.0_220.1_00462.t1
atgcctggtaaggactctaacacagataacagtgataatgatgtggtgattgtaaaagaagagtttatagaccctgaata
tataggaagcagcactgtagatacacaggaacaatcaaaggagtatggacaaataaacacagtaattactgaggacacag
ataactcccattctagctgtgctgtgtatctggatgattcttcactttacaaggaacaatcaaaggagtatggacaaata
aacacagtaattactgaggacacagataactcccattctagctgtgctgtgtatctggatgattcttcactttacaagga
agcattggtagatcagattgatgtgtatgttaaagaagaaccaagtgacacagaatgctctaataaatgtagccaagaag
attttgagtcaccagtgagtgagtttgcttacatagatgatatctcagttgaaaagaggcccaagttatgtgtgcgaaaa
agtagaggagtttatcaggtatacacttctgaggagaaagccaaaatagccaagtacgccatcgaaaatggaattgcaaa
cgctgttagacatttttcaaaaattctgaacaagcggcttcgagaaagcactgtccgtgactttaaaaagaaatacttgt
cccagttggaagaaatggattttactgatattaagaaaattgattccaaacggagaggaagacccagagttcctccccct
ccacctcccgagtctcctccacctcctcccctngctgttagacatttttcaaaaattctgaacaagcggcttcgagaaag
cactgtccgtgactttaaaaagaaatacttgtcccagttggaagaaatggattttactgatattaagaaaattgattcca
aacggagaggaagacccagagttcctccccctccacctcccgagtctcctccacctcctcccctacctcccggggagagg
agaaagaggggagagtatcaaaagtatacacctgaaatcaaagcagctttagccaaatatgccatagatgtaggttgtgc
aaaagcatcaaaatacttttcaaaattgatgaatagacatataaacgaaagtactatcagaagctttagacgaagctacc
ttgagcaggggaatggggaggatcttcagactttagagtgcaggaaaagaggtcgaccaaaagtgaagccatactctact
caggttatagaccatataatagagcatgggagtttaccgtctaaaacatcctgtagggaattcttgatgcaggaagaaaa
ggcaattaaaaaagaagaagaggatataaatatcatgcaggcaatgattattgaagcacaaggtacatccattcctgata
atctctcatttgaaggcagagatatcagctatcccgtgactgtagaaacagtgggagattgtgaggagaacaaaaatgta
aaagagaccttggacagagattttgacgatgtgaattcagatggtgaagaaatgcaagagttagtgaaaaattgtgactc
tgaatcaaaacaaacagaagatggcatttgcagtgaagaaaagtga

Protein
Protein IDpfu_aug2.0_220.1_00462.t1
Definition-
>pfu_aug2.0_220.1_00462.t1
MPGKDSNTDNSDNDVVIVKEEFIDPEYIGSSTVDTQEQSKEYGQINTVITEDTDNSHSSCAVYLDDSSLYKEQSKEYGQI
NTVITEDTDNSHSSCAVYLDDSSLYKEALVDQIDVYVKEEPSDTECSNKCSQEDFESPVSEFAYIDDISVEKRPKLCVRK
SRGVYQVYTSEEKAKIAKYAIENGIANAVRHFSKILNKRLRESTVRDFKKKYLSQLEEMDFTDIKKIDSKRRGRPRVPPP
PPPESPPPPPXAVRHFSKILNKRLRESTVRDFKKKYLSQLEEMDFTDIKKIDSKRRGRPRVPPPPPPESPPPPPLPPGER
RKRGEYQKYTPEIKAALAKYAIDVGCAKASKYFSKLMNRHINESTIRSFRRSYLEQGNGEDLQTLECRKRGRPKVKPYST
QVIDHIIEHGSLPSKTSCREFLMQEEKAIKKEEEDINIMQAMIIEAQGTSIPDNLSFEGRDISYPVTVETVGDCEENKNV
KETLDRDFDDVNSDGEEMQELVKNCDSESKQTEDGICSEEK

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